Interactive Phylogenetics Module

Gene Id
LOC_Os09g10960

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
LOC_Os09g10960 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 0.0e+00 3378.2 1741 100.0
Zm00001d005507 Zea mays HOM04D003457 ORTHO04D004131 0.0e+00 2451.8 1633 78.0
GSVIVG01021781001 Vitis vinifera HOM04D003457 ORTHO04D004131 0.0e+00 1896.3 1762 58.5
Ciclev10000014m.g Citrus clementina HOM04D003457 ORTHO04D004131 0.0e+00 1876.3 1828 56.6
ZJU.LOC107412197 Ziziphus jujuba HOM04D003457 ORTHO04D004131 0.0e+00 1865.1 1833 57.1
Cucsa.133270 Cucumis sativus L. HOM04D003457 ORTHO04D004131 0.0e+00 1849.3 1811 57.6
RCO.g.29598.000021 Ricinus communis HOM04D003457 ORTHO04D004131 0.0e+00 1842.8 1782 57.8
Prupe.6G343600 Prunus persica HOM04D003457 ORTHO04D004131 0.0e+00 1838.9 1845 56.5
Manes.09G152800 Manihot esculenta HOM04D003457 ORTHO04D004131 0.0e+00 1835.8 1848 55.5
MELO3C004380 Cucumis melo HOM04D003457 ORTHO04D004131 0.0e+00 1830.1 1802 57.0
HBR1657G064 Hevea brasiliensis HOM04D003457 ORTHO04D004131 0.0e+00 1824.7 1848 55.9
Potri.005G053700 Populus trichocarpa HOM04D003457 ORTHO04D004131 0.0e+00 1818.1 1848 55.8
Cla019807.g Citrullus lanatus HOM04D003457 ORTHO04D004131 0.0e+00 1810.8 1804 56.0
C.cajan_10759.g Cajanus cajan HOM04D003457 ORTHO04D004131 0.0e+00 1807.3 1792 57.1
TCA.TCM_026345 Theobroma cacao HOM04D003457 ORTHO04D004131 0.0e+00 1803.9 1833 55.8
Glyma.19G245100 Glycine max HOM04D003457 ORTHO04D004131 0.0e+00 1800.8 1841 55.5
Glyma.03G247300 Glycine max HOM04D003457 ORTHO04D004131 0.0e+00 1794.2 1835 55.4
Gorai.004G246800 Gossypium raimondii HOM04D003457 ORTHO04D004131 0.0e+00 1793.5 1829 55.2
Peaxi162Scf00282g00418 Petunia axillaris HOM04D003457 ORTHO04D004131 0.0e+00 1788.5 1803 54.8
Medtr7g115190 Medicago truncatula HOM04D003457 ORTHO04D004131 0.0e+00 1786.9 1825 55.3
Ca_01236.g Cicer arietinum HOM04D003457 ORTHO04D004131 0.0e+00 1785.8 1842 55.0
FVE16566 Fragaria vesca HOM04D003457 ORTHO04D004131 0.0e+00 1785.0 1855 55.1
Solyc01g097320.2 Solanum lycopersicum HOM04D003457 ORTHO04D004131 0.0e+00 1781.9 1799 54.2
HBR1944G012 Hevea brasiliensis HOM04D003457 ORTHO04D004131 0.0e+00 1780.4 1845 55.2
COL.COLO4_15351 Corchorus olitorius HOM04D003457 ORTHO04D004131 0.0e+00 1772.3 1827 54.9
DCAR_023243 Daucus carota HOM04D003457 ORTHO04D004131 0.0e+00 1755.7 1802 53.2
AUR62004951 Chenopodium quinoa HOM04D003457 ORTHO04D004131 0.0e+00 1754.2 1806 54.6
Cc02_g30700 Coffea canephora HOM04D003457 ORTHO04D004131 0.0e+00 1753.4 1808 53.9
ATR0665G632 Amborella trichopoda HOM04D003457 ORTHO04D004131 0.0e+00 1750.7 1880 53.2
Vradi10g05680 Vigna radiata var. radiata HOM04D003457 ORTHO04D004131 0.0e+00 1736.5 1843 54.9
Achn370471 Actinidia chinensis HOM04D003457 ORTHO04D004131 0.0e+00 1731.1 1816 54.6
Pbr004360.1.g Pyrus bretschneideri HOM04D003457 ORTHO04D004131 0.0e+00 1728.8 1843 53.7
Araip.DEM3R Arachis ipaensis HOM04D003457 ORTHO04D004131 0.0e+00 1728.4 1839 54.4
DCAR_014751 Daucus carota HOM04D003457 ORTHO04D004131 0.0e+00 1725.7 1817 53.5
Eucgr.B02119 Eucalyptus grandis HOM04D003457 ORTHO04D004131 0.0e+00 1717.6 1768 54.8
AL3G14870 Arabidopsis lyrata HOM04D003457 ORTHO04D004131 0.0e+00 1717.2 1771 54.7
TPR.G6924 Trifolium pratense HOM04D003457 ORTHO04D004131 0.0e+00 1716.4 1817 54.4
THA.LOC104818630 Tarenaya hassleriana HOM04D003457 ORTHO04D004131 0.0e+00 1715.7 1778 54.5
AT3G04740 Arabidopsis thaliana HOM04D003457 ORTHO04D004131 0.0e+00 1706.4 1772 53.3
Migut.B01091 Erythranthe guttata HOM04D003457 ORTHO04D004131 0.0e+00 1702.6 1838 51.6
Medtr1g087060 Medicago truncatula HOM04D003457 ORTHO04D004131 0.0e+00 1702.6 1805 54.3
Bv4_082280_jwgm Beta vulgaris HOM04D003457 ORTHO04D004131 0.0e+00 1698.7 1803 54.1
Tp3g03590 Schrenkiella parvula HOM04D003457 ORTHO04D004131 0.0e+00 1698.7 1773 54.0
Carubv10012804m.g Capsella rubella HOM04D003457 ORTHO04D004131 0.0e+00 1677.1 1767 53.8
THA.LOC104821672 Tarenaya hassleriana HOM04D003457 ORTHO04D004131 0.0e+00 1655.2 1785 53.4
Brara.E03427 Brassica rapa HOM04D003457 ORTHO04D004131 0.0e+00 1614.7 1748 53.1
Bo5g147020 Brassica oleracea HOM04D003457 ORTHO04D004131 0.0e+00 1608.2 1747 52.9
UGI.Scf00027.3309 Utricularia gibba HOM04D003457 ORTHO04D004131 0.0e+00 1558.1 1780 50.1
AUR62001006 Chenopodium quinoa HOM04D003457 ORTHO04D004131 0.0e+00 1553.1 1822 50.3
LOC_Os08g24420 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 0.0e+00 1369.4 1200 63.8
Mapoly0110s0011 Marchantia polymorpha HOM04D003457 ORTHO04D004131 0.0e+00 1233.8 1991 40.8
AH010805 Amaranthus hypochondriacus HOM04D003457 ORTHO04D004131 0.0e+00 1190.6 1335 53.3
SMO118G0536 Selaginella moellendorffii HOM04D003457 ORTHO04D004131 0.0e+00 1140.6 1789 40.7
CAN.G134.97 Capsicum annuum HOM04D003457 ORTHO04D004131 0.0e+00 1127.5 1229 49.7
Potri.013G041201 Populus trichocarpa HOM04D003457 ORTHO04D004131 0.0e+00 1089.7 1034 60.5
Pp3c9_5080 Physcomitrium patens HOM04D003457 ORTHO04D004131 1.2e-304 1049.7 1929 36.7
Pp3c9_4280 Physcomitrium patens HOM04D003457 ORTHO04D004131 4.5e-299 1031.2 1973 36.6
MDO.mRNA.g.1214.38 Malus domestica HOM04D003457 ORTHO04D004131 3.4e-230 802.4 1531 38.3
LOC_Os08g24400 Oryza sativa ssp. japonica HOM04D003457 ORTHO04D004131 3.0e-186 656.4 430 77.0
Araip.Z5FIW Arachis ipaensis HOM04D003457 ORTHO04D004131 5.2e-186 655.6 1102 39.5
MDO.mRNA.g.1570.9 Malus domestica HOM04D003457 ORTHO04D004131 3.5e-182 642.9 770 50.3
CAN.G134.96 Capsicum annuum HOM04D003457 ORTHO04D004131 3.6e-171 606.3 476 68.7
Cpa.g.sc2756.2 Carica papaya HOM04D003457 ORTHO04D004131 1.8e-167 594.0 515 60.0
NNU_14282 Nelumbo nucifera HOM04D003457 ORTHO04D004131 1.9e-156 557.4 426 65.0
AH010806 Amaranthus hypochondriacus HOM04D003457 ORTHO04D004131 5.6e-156 555.8 474 60.3
NNU_14283 Nelumbo nucifera HOM04D003457 ORTHO04D004131 4.6e-150 536.2 452 67.0
Araip.3CL0P Arachis ipaensis HOM04D003457 ORTHO04D004131 1.9e-143 514.2 493 54.0
Cpa.g.c42029 Carica papaya HOM04D003457 ORTHO04D004131 1.8e-122 444.5 352 62.8
PAB00015527 Picea abies HOM04D003457 ORTHO04D004131 1.6e-118 431.4 454 57.0
Cpa.g.sc2756.1 Carica papaya HOM04D003457 ORTHO04D004131 6.9e-90 336.3 264 76.9
Araip.G7VB0 Arachis ipaensis HOM04D003457 ORTHO04D004131 3.5e-65 254.2 215 58.6
Cpa.g.sc2756.3 Carica papaya HOM04D003457 ORTHO04D004131 8.0e-62 243.0 344 45.1
PAB00028221 Picea abies HOM04D003457 ORTHO04D004131 8.0e-54 216.5 245 51.0
PAB00015301 Picea abies HOM04D003457 ORTHO04D004131 8.8e-53 213.0 222 54.5
Araip.4E2GG Arachis ipaensis HOM04D003457 ORTHO04D004131 3.0e-45 188.0 374 37.4
PAB00057672 Picea abies HOM04D003457 ORTHO04D004131 9.8e-44 183.0 151 52.3
PAB00015300 Picea abies HOM04D003457 ORTHO04D004131 1.7e-43 182.2 264 44.3
PAB00015525 Picea abies HOM04D003457 ORTHO04D004131 7.0e-42 176.8 147 58.5
MDO.mRNA.g.1214.37 Malus domestica HOM04D003457 ORTHO04D004131 1.2e-33 149.4 141 58.2
PAB00014440 Picea abies HOM04D003457 ORTHO04D004131 3.7e-27 127.9 87 67.8
PAB00046164 Picea abies HOM04D000420 ORTHO04D004131 2.4e-26 125.2 105 56.2
Cpa.g.sc1346.1 Carica papaya HOM04D003457 ORTHO04D004131 2.5e-15 88.6 79 62.0
Bo3g058590 Brassica oleracea HOM04D003457 ORTHO04D004131 5.6e-15 87.4 50 76.0
PAB00029086 Picea abies HOM04D003457 ORTHO04D004131 8.1e-14 83.6 203 30.0
PAB00044175 Picea abies HOM04D003457 ORTHO04D004131 2.4e-13 82.0 72 48.6
CAN.G1116.5 Capsicum annuum HOM04D003457 ORTHO04D004131 2.6e-12 78.6 79 53.2
MCO11G870 Micromonas commoda HOM04D003457 ORTHO04D004131 2.6e-12 78.6 216 27.8
Pp3c15_3250 Physcomitrium patens HOM04D003457 ORTHO04D004131 5.1e-08 64.3 260 28.8
PAB00062172 Picea abies HOM04D003457 ORTHO04D004131 5.1e-08 64.3 64 46.9
Gorai.004G036500 Gossypium raimondii HOM04D003457 ORTHO04D004131 8.7e-08 63.5 34 73.5
Potri.007G107700 Populus trichocarpa HOM04D003457 ORTHO04D004131 1.1e-07 63.2 74 47.3
PAB00017816 Picea abies HOM04D001763 ORTHO04D002207 6.2e-06 57.4 120 40.0
PAB00028414 Picea abies HOM04D003457 ORTHO04D004131 6.2e-06 57.4 52 44.2

Actinidia chinensis (1 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (1 genes)
Arabidopsis lyrata (1 genes)
Arabidopsis thaliana (1 genes)
Arachis ipaensis (5 genes)
Beta vulgaris (1 genes)
Brassica oleracea (2 genes)
Brassica rapa (1 genes)
Cajanus cajan (1 genes)
Capsella rubella (1 genes)
Capsicum annuum (3 genes)
Carica papaya (5 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (0 genes)
Cicer arietinum (1 genes)
Citrullus lanatus (1 genes)
Citrus clementina (1 genes)
Coffea canephora (1 genes)
Corchorus olitorius (1 genes)
Cucumis melo (1 genes)
Cucumis sativus L. (1 genes)
Daucus carota (2 genes)
Erythranthe guttata (1 genes)
Eucalyptus grandis (1 genes)
Fragaria vesca (1 genes)
Glycine max (2 genes)
Gossypium raimondii (2 genes)
Hevea brasiliensis (2 genes)
Malus domestica (3 genes)
Manihot esculenta (1 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (2 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (2 genes)
Oryza sativa ssp. japonica (3 genes)
Petunia axillaris (1 genes)
Physcomitrium patens (3 genes)
Picea abies (13 genes)
Populus trichocarpa (3 genes)
Prunus persica (1 genes)
Pyrus bretschneideri (1 genes)
Ricinus communis (1 genes)
Schrenkiella parvula (1 genes)
Selaginella moellendorffii (1 genes)
Solanum lycopersicum (1 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (2 genes)
Theobroma cacao (1 genes)
Trifolium pratense (1 genes)
Utricularia gibba (1 genes)
Vigna radiata var. radiata (1 genes)
Vitis vinifera (1 genes)
Zea mays (1 genes)
Ziziphus jujuba (1 genes)

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