Gossypium raimondii

Gossypium raimondii is thought to be a progenitor of the D sub-genome of commercially grown cotton varieties (Gossypium hirsutum and Gossypium barbadense, which are due to their complex genome structure difficult to sequence). Cotton is one of the world's most important economically grown crops, the fibers it produces are used for the production of threads and fabrics. An estimated 5% of the available arable land worldwide is dedicated to growing cotton. Furthermore it is a valuable model species to study cell elongation and cell wall production.
Publication:
The draft genome of a diploid cotton Gossypium raimondii.
Info and Links
Source | JGI v2.1 |
PLAZA identifier | gra |
NCBI link | Gossypium raimondii |
Mitochondrion | Not available |
Chloroplast | Not available |
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Annotations
Page 1 of 1876, showing 20 records out of 37505 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
Gorai.001G000100 | Gorai.001G000100.1 | 6158 | 6415 | - | Chr01 | coding | HOM04D003957 | ORTHO04D005137 |
Gorai.001G000200 | Gorai.001G000200.1 | 7147 | 7479 | - | Chr01 | coding | HOM04D001734 | ORTHO04D003495 |
Gorai.001G000300 | Gorai.001G000300.1 | 7505 | 9700 | - | Chr01 | coding | HOM04D001734 | ORTHO04D003495 |
Gorai.001G000400 | Gorai.001G000400.2 | 14460 | 25136 | - | Chr01 | coding | HOM04D000190 | ORTHO04D001811 |
Gorai.001G000500 | Gorai.001G000500.1 | 29207 | 30678 | - | Chr01 | coding | HOM04D004987 | ORTHO04D005863 |
Gorai.001G000600 | Gorai.001G000600.1 | 45684 | 46926 | - | Chr01 | coding | HOM04D001181 | ORTHO04D001024 |
Gorai.001G000700 | Gorai.001G000700.1 | 57462 | 58361 | - | Chr01 | coding | Orphan Gene | Orphan Gene |
Gorai.001G000800 | Gorai.001G000800.1 | 74868 | 76487 | - | Chr01 | coding | HOM04D001875 | ORTHO04D001993 |
Gorai.001G000900 | Gorai.001G000900.1 | 78917 | 86590 | - | Chr01 | coding | HOM04D000083 | ORTHO04D003926 |
Gorai.001G001000 | Gorai.001G001000.1 | 117441 | 119043 | + | Chr01 | coding | HOM04D005913 | ORTHO04D006970 |
Gorai.001G001100 | Gorai.001G001100.1 | 120160 | 128441 | - | Chr01 | coding | HOM04D003621 | ORTHO04D004765 |
Gorai.001G001200 | Gorai.001G001200.1 | 136048 | 140588 | + | Chr01 | coding | HOM04D000031 | ORTHO04D002109 |
Gorai.001G001300 | Gorai.001G001300.1 | 144838 | 148427 | - | Chr01 | coding | HOM04D002803 | ORTHO04D003521 |
Gorai.001G001400 | Gorai.001G001400.1 | 149635 | 150570 | + | Chr01 | coding | HOM04D000614 | ORTHO04D006694 |
Gorai.001G001500 | Gorai.001G001500.1 | 151765 | 153674 | - | Chr01 | coding | HOM04D003630 | ORTHO04D004608 |
Gorai.001G001600 | Gorai.001G001600.1 | 155053 | 160783 | + | Chr01 | coding | HOM04D007000 | ORTHO04D008507 |
Gorai.001G001700 | Gorai.001G001700.1 | 161450 | 162266 | + | Chr01 | coding | HOM04D004274 | Orphan Gene |
Gorai.001G001800 | Gorai.001G001800.1 | 166877 | 168130 | - | Chr01 | coding | HOM04D000032 | ORTHO04D000367 |
Gorai.001G001900 | Gorai.001G001900.1 | 170340 | 171590 | + | Chr01 | coding | HOM04D001118 | ORTHO04D000951 |
Gorai.001G002000 | Gorai.001G002000.1 | 172831 | 174887 | - | Chr01 | coding | HOM04D000204 | ORTHO04D000259 |