Physcomitrium patens
Physcomitrium (previously Physcomitrella) patens has, like most mosses, a much simpler morphology then vascular plants, therefore this is an excellent model for studying developmental and physiological processes. It's genome is a great asset in comparative genomics as it can be used as an outgroup for the Angiosperms.
Publication:
The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants.
Info and Links
Source | JGI v3.3 |
PLAZA identifier | ppa |
NCBI link | Physcomitrium patens |
Mitochondrion | AB251495 |
Chloroplast | AP005672 |
Toolbox
Annotations
Page 1 of 1647, showing 20 records out of 32926 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
Pp3s97_10 | Pp3s97_10V3.1 | 385 | 546 | - | scaffold_97 | coding | Orphan Gene | Orphan Gene |
Pp3s97_50 | Pp3s97_50V3.1 | 21733 | 25996 | + | scaffold_97 | coding | HOM04D003521 | ORTHO04D004355 |
Pp3s96_80 | Pp3s96_80V3.1 | 41920 | 42876 | + | scaffold_96 | coding | HOM04D000242 | ORTHO04D000255 |
Pp3s96_10 | Pp3s96_10V3.1 | 1 | 3141 | + | scaffold_96 | coding | HOM04D022851 | Orphan Gene |
Pp3s96_60 | Pp3s96_60V3.1 | 25537 | 38888 | + | scaffold_96 | coding | HOM04D007982 | ORTHO04D023917 |
Pp3s96_50 | Pp3s96_50V3.1 | 22025 | 23353 | + | scaffold_96 | coding | HOM04D007982 | ORTHO04D023917 |
Pp3s96_40 | Pp3s96_40V3.2 | 10997 | 11740 | + | scaffold_96 | coding | HOM04D005930 | ORTHO04D018234 |
Pp3s96_91 | Pp3s96_91V3.1 | 43417 | 44704 | - | scaffold_96 | coding | HOM04D036695 | ORTHO04D016632 |
Pp3s96_90 | Pp3s96_90V3.1 | 41002 | 41820 | + | scaffold_96 | coding | HOM04D037356 | ORTHO04D026319 |
Pp3s96_30 | Pp3s96_30V3.1 | 9163 | 10707 | - | scaffold_96 | coding | HOM04D035396 | Orphan Gene |
Pp3s96_100 | Pp3s96_100V3.1 | 45358 | 46281 | + | scaffold_96 | coding | HOM04D017828 | ORTHO04D016632 |
Pp3s96_70 | Pp3s96_70V3.1 | 39822 | 40418 | + | scaffold_96 | coding | HOM04D037046 | Orphan Gene |
Pp3s96_20 | Pp3s96_20V3.1 | 3279 | 3986 | - | scaffold_96 | coding | HOM04D014415 | Orphan Gene |
Pp3s318_30 | Pp3s318_30V3.2 | 3952 | 7251 | + | scaffold_318 | coding | HOM04D000952 | ORTHO04D002512 |
Pp3s318_20 | Pp3s318_20V3.1 | 925 | 2318 | + | scaffold_318 | coding | HOM04D000952 | ORTHO04D002512 |
Pp3s93_30 | Pp3s93_30V3.7 | 27234 | 29429 | + | scaffold_93 | coding | HOM04D000254 | ORTHO04D001310 |
Pp3s93_13 | Pp3s93_13V3.1 | 475 | 811 | + | scaffold_93 | coding | HOM04D028240 | Orphan Gene |
Pp3s92_20 | Pp3s92_20V3.1 | 306 | 3588 | + | scaffold_92 | coding | HOM04D001240 | Orphan Gene |
Pp3s92_10 | Pp3s92_10V3.1 | 3 | 200 | + | scaffold_92 | coding | Orphan Gene | Orphan Gene |
Pp3s92_50 | Pp3s92_50V3.1 | 8804 | 11840 | + | scaffold_92 | coding | HOM04D037030 | Orphan Gene |