Carica papaya

Carica papaya is a tropical plant, the version sequenced is actually a transgenetic strain called ''SunUp'' papaya. Making this the first sequenced transgenetic plant. Unlike many of the plants indigenous to Hawaii papaya had no evidence of additional whole genome duplications. This allowed plant researchers to unambiguously place the duplications in Arabidopsis thaliana and popular onto the phylogenetic tree.

Publication:
The draft genome of the transgenic tropical fruit tree papaya (Carica papaya Linnaeus)

Info and Links

Source JGI ASGPB0.4
PLAZA identifier cpa
NCBI link Carica papaya
Mitochondrion Not available
Chloroplast Not available

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Genes

Annotations

Page 1 of 1389, showing 20 records out of 27768 total, starting on record 1, ending on 20

Gene Transcript Start Stop Strand Chr Type Homologous gene familyOrthologous gene family
Cpa.g.c23646Cpa.t.c23646.350965506-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.1Cpa.t.c23646.135123922-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.2Cpa.t.c23646.250965506-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.4Cpa.t.c23646.482598669-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.5Cpa.t.c23646.54225042648+contig_23646codingOrphan GeneOrphan Gene
Cpa.g.c23646.6Cpa.t.c23646.68102281432-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.7Cpa.t.c23646.78260183011-contig_23646codingHOM04D010736ORTHO04D012588
Cpa.g.c23646.8Cpa.t.c23646.8131528132304+contig_23646codingHOM04D000400ORTHO04D000580
Cpa.g.c24415.10Cpa.t.c24415.103425636326-contig_24415codingHOM04D000227ORTHO04D000234
Cpa.g.c24415.11Cpa.t.c24415.113832538636+contig_24415codingOrphan GeneOrphan Gene
Cpa.g.c24415.12Cpa.t.c24415.123880139530-contig_24415codingHOM04D000004ORTHO04D000005
Cpa.g.c24415.13Cpa.t.c24415.134045550112+contig_24415codingHOM04D003333ORTHO04D006005
Cpa.g.c24415.14Cpa.t.c24415.145125953249+contig_24415codingHOM04D002010ORTHO04D002253
Cpa.g.c24415.2Cpa.t.c24415.233463894-contig_24415codingHOM04D006578ORTHO04D008046
Cpa.g.c24415.3Cpa.t.c24415.371987593+contig_24415codingHOM04D007878ORTHO04D010216
Cpa.g.c24415.4Cpa.t.c24415.41041611119+contig_24415codingHOM04D005457ORTHO04D006696
Cpa.g.c24415.5Cpa.t.c24415.51327614247+contig_24415codingHOM04D000087ORTHO04D000210
Cpa.g.c24415.6Cpa.t.c24415.61543620087-contig_24415codingHOM04D002523ORTHO04D003765
Cpa.g.c24415.7Cpa.t.c24415.72255824582+contig_24415codingHOM04D000227ORTHO04D000234
Cpa.g.c24415.8Cpa.t.c24415.82532825510-contig_24415codingOrphan GeneOrphan Gene