Coffea canephora
Robusta coffee
Publication:
The coffee genome provides insight into the convergent evolution of caffeine biosynthesis
Info and Links
Source | Coffee Genome Hub v1 |
PLAZA identifier | ccan |
NCBI link | Coffea canephora |
Mitochondrion | Not available |
Chloroplast | Not available |
Toolbox
Annotations
Page 1 of 23481, showing 20 records out of 469604 total, starting on record 1, ending on 20
Gene | Transcript | Start | Stop | Strand | Chr | Type | Homologous gene family | Orthologous gene family |
---|---|---|---|---|---|---|---|---|
Cc01_g00010 | Cc01_g00010.1 | 390 | 1820 | - | chr1 | coding | HOM04D000010 | ORTHO04D000230 |
Cc01_g00020 | Cc01_g00020.1 | 5023 | 10877 | - | chr1 | coding | HOM04D007184 | ORTHO04D009323 |
Cc01_g00030 | Cc01_g00030.1 | 13982 | 33499 | + | chr1 | coding | HOM04D003964 | ORTHO04D005036 |
Cc01_g00040 | Cc01_g00040.1 | 37175 | 39395 | + | chr1 | coding | HOM04D000075 | ORTHO04D000359 |
Cc01_g00050 | Cc01_g00050.1 | 76911 | 77099 | - | chr1 | coding | Orphan Gene | Orphan Gene |
Cc01_g00060 | Cc01_g00060.1 | 83826 | 85370 | + | chr1 | coding | HOM04D001276 | ORTHO04D001159 |
Cc01_g00070 | Cc01_g00070.1 | 87508 | 105526 | - | chr1 | coding | HOM04D001835 | ORTHO04D002514 |
Cc01_g00080 | Cc01_g00080.1 | 110077 | 112993 | - | chr1 | coding | HOM04D000133 | ORTHO04D000113 |
Cc01_g00090 | Cc01_g00090.1 | 127970 | 128260 | + | chr1 | coding | Orphan Gene | Orphan Gene |
Cc01_g00100 | Cc01_g00100.1 | 133821 | 135269 | + | chr1 | coding | HOM04D005808 | ORTHO04D007235 |
Cc01_g00110 | Cc01_g00110.1 | 135870 | 136467 | + | chr1 | coding | Orphan Gene | Orphan Gene |
Cc01_g00120 | Cc01_g00120.1 | 136527 | 138644 | + | chr1 | coding | HOM04D000001 | ORTHO04D000001 |
Cc01_g00130 | Cc01_g00130.1 | 144186 | 144650 | - | chr1 | coding | HOM04D003821 | ORTHO04D004875 |
Cc01_g00140 | Cc01_g00140.1 | 147799 | 164628 | + | chr1 | coding | HOM04D001284 | ORTHO04D006322 |
Cc01_g00150 | Cc01_g00150.1 | 168409 | 170725 | + | chr1 | coding | HOM04D007681 | ORTHO04D009766 |
Cc01_g00160 | Cc01_g00160.1 | 172130 | 174622 | - | chr1 | coding | HOM04D003861 | ORTHO04D004615 |
Cc01_g00170 | Cc01_g00170.1 | 180581 | 183123 | + | chr1 | coding | HOM04D000047 | ORTHO04D000433 |
Cc01_g00180 | Cc01_g00180.1 | 188610 | 190662 | + | chr1 | coding | HOM04D000047 | ORTHO04D000433 |
Cc01_g00190 | Cc01_g00190.1 | 191298 | 193965 | - | chr1 | coding | HOM04D005255 | ORTHO04D007277 |
Cc01_g00200 | Cc01_g00200.1 | 195621 | 199258 | - | chr1 | coding | HOM04D000411 | ORTHO04D001784 |