Interactive Phylogenetics Module

Gene Id
AT1G04080

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time could be too to stall the browser.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Include Gene ID Organism Homologous gene familyOrthologous gene family E-value Bitscore Alignment Length Identity Percentage
AT1G04080 Arabidopsis thaliana HOM04D002079 ORTHO04D002619 0.0e+00 1464.9 824 100.0
AL1G13680 Arabidopsis lyrata HOM04D002079 ORTHO04D002619 0.0e+00 1328.5 824 91.1
Carubv10010956m.g Capsella rubella HOM04D002079 ORTHO04D002619 0.0e+00 1314.3 830 86.9
Tp1g02900 Schrenkiella parvula HOM04D002079 ORTHO04D002619 1.2e-310 1068.5 839 74.6
Brara.J00229 Brassica rapa HOM04D002079 ORTHO04D002619 6.6e-309 1062.8 826 75.2
Bo5g004290 Brassica oleracea HOM04D002079 ORTHO04D002619 8.1e-307 1055.8 775 75.4
THA.LOC104816099 Tarenaya hassleriana HOM04D002079 ORTHO04D002619 3.4e-305 1050.4 804 69.8
Bo8g002740 Brassica oleracea HOM04D002079 ORTHO04D002619 2.8e-291 1004.2 785 71.6
Brara.H03065 Brassica rapa HOM04D002079 ORTHO04D002619 2.0e-281 971.5 735 71.6
THA.LOC104826051 Tarenaya hassleriana HOM04D002079 ORTHO04D002619 4.6e-278 960.3 807 66.4
Tp2g08790 Schrenkiella parvula HOM04D002079 ORTHO04D002619 2.5e-255 884.8 786 66.0
Ciclev10018866m.g Citrus clementina HOM04D002079 ORTHO04D002619 2.2e-251 871.7 765 60.8
ZJU.LOC107434228 Ziziphus jujuba HOM04D002079 ORTHO04D002619 2.4e-250 868.2 762 60.2
TCA.TCM_003910 Theobroma cacao HOM04D002079 ORTHO04D002619 1.7e-248 862.1 833 58.8
Gorai.001G181500 Gossypium raimondii HOM04D002079 ORTHO04D002619 1.5e-247 859.0 786 60.3
Glyma.03G167000 Glycine max HOM04D002079 ORTHO04D002619 1.9e-247 858.6 779 59.2
Prupe.8G215900 Prunus persica HOM04D002079 ORTHO04D002619 7.2e-247 856.7 753 60.7
Gorai.001G237700 Gossypium raimondii HOM04D002079 ORTHO04D002619 2.7e-246 854.7 887 55.0
Gorai.007G149700 Gossypium raimondii HOM04D002079 ORTHO04D002619 8.0e-246 853.2 825 56.8
Glyma.19G168100 Glycine max HOM04D002079 ORTHO04D002619 8.2e-243 843.2 835 57.5
TPR.G20054 Trifolium pratense HOM04D002079 ORTHO04D002619 1.2e-238 829.3 808 56.1
Manes.13G040100 Manihot esculenta HOM04D002079 ORTHO04D002619 3.6e-238 827.8 777 57.5
Medtr7g098430 Medicago truncatula HOM04D002079 ORTHO04D002619 8.0e-238 826.6 830 57.0
MELO3C022388 Cucumis melo HOM04D002079 ORTHO04D002619 8.0e-238 826.6 775 57.8
Ca_12261.g Cicer arietinum HOM04D002079 ORTHO04D002619 3.4e-236 821.2 840 57.6
Cucsa.348900 Cucumis sativus L. HOM04D002079 ORTHO04D002619 5.7e-236 820.5 752 58.8
HBR2625G005 Hevea brasiliensis HOM04D002079 ORTHO04D002619 1.7e-235 818.9 784 56.5
HBR1068G011 Hevea brasiliensis HOM04D002079 ORTHO04D002619 8.3e-235 816.6 785 56.8
Pbr032901.1.g Pyrus bretschneideri HOM04D002079 ORTHO04D002619 4.1e-234 814.3 761 58.9
Bv7_166710_nftu Beta vulgaris HOM04D002079 ORTHO04D002619 3.8e-232 807.7 713 60.3
C.cajan_16464.g Cajanus cajan HOM04D002079 ORTHO04D002619 1.4e-229 799.3 785 55.9
Cla007067.g Citrullus lanatus HOM04D002079 ORTHO04D002619 9.8e-228 793.1 783 55.2
RCO.g.29637.000018 Ricinus communis HOM04D002079 ORTHO04D002619 9.8e-228 793.1 713 58.2
Potri.002G257100 Populus trichocarpa HOM04D002079 ORTHO04D002619 5.4e-226 787.3 879 52.9
AH013549 Amaranthus hypochondriacus HOM04D002079 ORTHO04D002619 2.0e-225 785.4 710 58.2
Potri.014G192800 Populus trichocarpa HOM04D002079 ORTHO04D002619 3.8e-224 781.2 745 58.1
CAN.G536.17 Capsicum annuum HOM04D002079 ORTHO04D002619 1.6e-222 775.8 776 55.8
Migut.D00473 Erythranthe guttata HOM04D002079 ORTHO04D002619 6.8e-221 770.4 736 56.2
THA.LOC104801556 Tarenaya hassleriana HOM04D002079 ORTHO04D002619 2.0e-220 768.8 638 62.5
NNU_10283 Nelumbo nucifera HOM04D002079 ORTHO04D002619 3.4e-220 768.1 843 57.3
AUR62008790 Chenopodium quinoa HOM04D002079 ORTHO04D002619 4.9e-219 764.2 739 55.6
NNU_10529 Nelumbo nucifera HOM04D002079 ORTHO04D002619 4.1e-218 761.1 661 60.5
Peaxi162Scf00043g02923 Petunia axillaris HOM04D002079 ORTHO04D002619 7.0e-218 760.4 739 56.6
Cpa.g.sc87.24 Carica papaya HOM04D002079 ORTHO04D002619 6.0e-217 757.3 853 56.6
AUR62025445 Chenopodium quinoa HOM04D002079 ORTHO04D002619 1.3e-216 756.1 763 55.0
DCAR_004690 Daucus carota HOM04D002079 ORTHO04D002619 1.7e-216 755.7 843 51.6
Eucgr.K01429 Eucalyptus grandis HOM04D002079 ORTHO04D002619 4.0e-213 744.6 726 54.0
UGI.Scf00444.15979 Utricularia gibba HOM04D002079 ORTHO04D002619 2.9e-211 738.4 787 52.7
Solyc09g064590.2 Solanum lycopersicum HOM04D002079 ORTHO04D002619 2.9e-211 738.4 783 52.5
FVE08331 Fragaria vesca HOM04D002079 ORTHO04D002619 1.2e-209 733.0 770 54.5
UGI.Scf00093.7591 Utricularia gibba HOM04D002079 ORTHO04D002619 9.2e-202 706.8 689 54.4
ATR0787G201 Amborella trichopoda HOM04D002079 ORTHO04D002619 3.5e-201 704.9 791 50.6
HBR2625G002 Hevea brasiliensis HOM04D002079 ORTHO04D002619 1.8e-197 692.6 659 56.9
Achn070791 Actinidia chinensis HOM04D002079 ORTHO04D002619 9.0e-181 637.1 762 48.7
Zm00001d048119 Zea mays HOM04D002079 ORTHO04D002619 9.3e-178 627.1 776 46.0
LOC_Os03g11200 Oryza sativa ssp. japonica HOM04D002079 ORTHO04D002619 1.0e-176 623.6 763 46.4
Achn078401 Actinidia chinensis HOM04D002079 ORTHO04D002619 5.6e-175 617.8 769 48.6
PAB00050413 Picea abies HOM04D002079 ORTHO04D002619 1.3e-174 616.7 706 48.9
Mapoly0104s0010 Marchantia polymorpha HOM04D002079 ORTHO04D002619 9.9e-172 607.1 650 49.5
Pp3c2_14560 Physcomitrium patens HOM04D002079 ORTHO04D002619 8.5e-155 550.8 666 44.9
Zm00001d028034 Zea mays HOM04D002079 ORTHO04D002619 6.9e-149 531.2 786 41.7
Pp3c1_23160 Physcomitrium patens HOM04D002079 ORTHO04D002619 1.2e-148 530.4 711 43.5
SMO356G0255 Selaginella moellendorffii HOM04D002079 ORTHO04D002619 2.1e-145 519.6 657 43.5
DCAR_004701 Daucus carota HOM04D002079 ORTHO04D002619 1.5e-143 513.5 775 42.1
MDO.mRNA.g.4725.2 Malus domestica HOM04D002079 ORTHO04D002619 2.6e-140 502.7 663 47.2
Achn127201 Actinidia chinensis HOM04D002079 ORTHO04D002619 5.5e-138 495.0 761 41.7
Pp3c27_7380 Physcomitrium patens HOM04D002079 ORTHO04D002619 3.6e-137 492.3 740 42.2
COL.COLO4_10571 Corchorus olitorius HOM04D002079 ORTHO04D002619 6.3e-126 454.9 385 62.6
GSVIVG01028423001 Vitis vinifera HOM04D002079 ORTHO04D002619 4.0e-120 435.6 367 62.4
Cc01_g17840 Coffea canephora HOM04D002079 ORTHO04D002619 4.4e-119 432.2 354 63.0
Cc01_g17830 Coffea canephora HOM04D002079 ORTHO04D002619 1.1e-114 417.5 418 58.6
ATR0130G010 Amborella trichopoda HOM04D002079 ORTHO04D002619 2.8e-113 412.9 644 36.6
Achn352521 Actinidia chinensis HOM04D002079 ORTHO04D002619 7.5e-111 404.8 546 45.1
Ciclev10014087m.g Citrus clementina HOM04D002079 ORTHO04D002619 3.1e-109 399.4 632 36.9
TCA.TCM_029561 Theobroma cacao HOM04D002079 ORTHO04D002619 1.2e-108 397.5 612 35.6
GSVIVG01021383001 Vitis vinifera HOM04D002079 ORTHO04D002619 1.3e-107 394.0 587 37.0
TPR.G6746 Trifolium pratense HOM04D002079 ORTHO04D002619 1.7e-107 393.7 634 35.5
Prupe.4G074100 Prunus persica HOM04D002079 ORTHO04D002619 2.5e-106 389.8 581 37.9
SMO165G0070 Selaginella moellendorffii HOM04D002079 ORTHO04D002619 3.3e-106 389.4 655 36.5
Manes.17G065200 Manihot esculenta HOM04D002079 ORTHO04D002619 1.6e-105 387.1 592 35.3
Medtr8g088050 Medicago truncatula HOM04D002079 ORTHO04D002619 2.8e-105 386.3 639 34.0
Brara.F03623 Brassica rapa HOM04D002079 ORTHO04D002619 1.0e-104 384.4 625 35.2
Ca_08648.g Cicer arietinum HOM04D002079 ORTHO04D002619 1.8e-104 383.6 596 34.9
Bo7g075330 Brassica oleracea HOM04D002079 ORTHO04D002619 4.0e-104 382.5 625 35.5
Gorai.009G157800 Gossypium raimondii HOM04D002079 ORTHO04D002619 8.9e-104 381.3 587 34.9
Vradi07g19620 Vigna radiata var. radiata HOM04D002079 ORTHO04D002619 2.0e-103 380.2 586 35.8
Pbr021329.1.g Pyrus bretschneideri HOM04D002079 ORTHO04D002619 5.8e-103 378.6 580 34.7
Pbr039534.2.g Pyrus bretschneideri HOM04D002079 ORTHO04D002619 5.8e-103 378.6 580 34.7
HBR1422G023 Hevea brasiliensis HOM04D002079 ORTHO04D002619 9.8e-103 377.9 593 36.1
Araip.JV35U Arachis ipaensis HOM04D002079 ORTHO04D002619 3.7e-102 375.9 596 34.7
AT5G46400 Arabidopsis thaliana HOM04D002079 ORTHO04D002619 8.3e-102 374.8 604 35.4
Tp2g11250 Schrenkiella parvula HOM04D002079 ORTHO04D002619 3.2e-101 372.9 624 34.9
COL.COLO4_22792 Corchorus olitorius HOM04D002079 ORTHO04D002619 4.1e-101 372.5 637 33.8
Carubv10025790m.g Capsella rubella HOM04D002079 ORTHO04D002619 1.7e-99 367.1 597 35.2
AL8G12010 Arabidopsis lyrata HOM04D002079 ORTHO04D002619 1.9e-98 363.6 603 35.3
MDO.mRNA.g.825.19 Malus domestica HOM04D002079 ORTHO04D002619 4.7e-97 359.0 717 36.8
Glyma.08G122000 Glycine max HOM04D002079 ORTHO04D002619 1.1e-96 357.8 592 34.5
THA.LOC104806115 Tarenaya hassleriana HOM04D002079 ORTHO04D002619 1.8e-96 357.1 588 35.5
ZJU.LOC107413009 Ziziphus jujuba HOM04D002079 ORTHO04D002619 3.4e-95 352.8 672 32.3
FVE24888 Fragaria vesca HOM04D002079 ORTHO04D002619 7.5e-95 351.7 601 33.3
Cc00_g03280 Coffea canephora HOM04D002079 ORTHO04D002619 2.9e-94 349.7 607 33.3
Cla019616.g Citrullus lanatus HOM04D002079 ORTHO04D002619 2.4e-93 346.7 603 33.8
Bv_003880_zunm Beta vulgaris HOM04D002079 ORTHO04D002619 7.0e-93 345.1 569 33.7
DCAR_007909 Daucus carota HOM04D002079 ORTHO04D002619 7.8e-92 341.7 597 34.5
THA.LOC104801125 Tarenaya hassleriana HOM04D002079 ORTHO04D002619 3.6e-89 332.8 408 47.3
MDO.mRNA.g.1615.14 Malus domestica HOM04D002079 ORTHO04D002619 1.4e-85 320.9 580 33.1
Peaxi162Scf00570g00116 Petunia axillaris HOM04D002079 ORTHO04D002619 4.6e-84 315.8 507 34.5
Migut.H01381 Erythranthe guttata HOM04D002079 ORTHO04D002619 2.3e-83 313.5 603 30.5
Solyc02g071230.1 Solanum lycopersicum HOM04D002079 ORTHO04D002619 3.6e-81 306.2 513 33.7
AH021334 Amaranthus hypochondriacus HOM04D002079 ORTHO04D002619 2.9e-78 296.6 628 28.7
LOC_Os08g29124 Oryza sativa ssp. japonica HOM04D002079 ORTHO04D002619 5.4e-77 292.4 626 30.0
RCO.g.29693.000112 Ricinus communis HOM04D002079 ORTHO04D002619 1.8e-72 277.3 423 37.1
MCO16G166 Micromonas commoda HOM04D002079 ORTHO04D002619 1.5e-71 274.2 646 31.9
MELO3C002707 Cucumis melo HOM04D002079 ORTHO04D002619 8.1e-65 251.9 369 37.9
GSVIVG01028422001 Vitis vinifera HOM04D002079 ORTHO04D002619 9.9e-63 245.0 200 63.0
GSVIVG01028421001 Vitis vinifera HOM04D002079 ORTHO04D002619 1.3e-54 218.0 181 62.4
Eucgr.D00340 Eucalyptus grandis HOM04D002079 ORTHO04D002619 3.5e-52 209.9 357 33.6
Araip.BL0I7 Arachis ipaensis HOM04D002079 ORTHO04D002619 3.3e-50 203.4 201 54.7
C.cajan_20522.g Cajanus cajan HOM04D002079 ORTHO04D002619 1.6e-49 201.1 379 33.5
Cre16.g670300 Chlamydomonas reinhardtii HOM04D002079 ORTHO04D002619 2.0e-47 194.1 651 29.2
Zm00001d032336 Zea mays HOM04D002079 ORTHO04D002619 7.9e-44 182.2 394 28.7
Bo5g132080 Brassica oleracea HOM04D002079 ORTHO04D058862 7.7e-39 165.6 378 34.7
CAN.G257.46 Capsicum annuum HOM04D002079 ORTHO04D002619 7.7e-39 165.6 256 37.5
DCAR_004686 Daucus carota HOM04D002079 ORTHO04D002619 1.3e-38 164.9 105 71.4
Bo5g079900 Brassica oleracea HOM04D002079 ORTHO04D002619 3.0e-27 127.1 89 77.5
RCO.g.42999.000001 Ricinus communis HOM04D002079 ORTHO04D002619 1.1e-24 118.6 185 34.1
Bv_003910_ajgu Beta vulgaris HOM04D002079 ORTHO04D002619 2.0e-23 114.4 114 45.6
Cpa.g.sc17.116 Carica papaya HOM04D002079 ORTHO04D002619 2.9e-22 110.5 165 37.0
Vradi03g09790 Vigna radiata var. radiata HOM04D002079 ORTHO04D002619 6.5e-22 109.4 98 56.1
Eucgr.C00013 Eucalyptus grandis HOM04D002079 ORTHO04D002619 6.5e-22 109.4 188 34.6
MDO.mRNA.g.2951.10 Malus domestica HOM04D002079 ORTHO04D002619 7.2e-21 105.9 182 39.0
Zm00001d032335 Zea mays HOM04D002079 ORTHO04D002619 2.1e-20 104.4 122 41.8
MDO.mRNA.g.598.3 Malus domestica HOM04D002079 ORTHO04D002619 1.5e-18 98.2 67 65.7
Bv_003900_ssug Beta vulgaris HOM04D002079 ORTHO04D002619 1.7e-17 94.7 169 30.2
Cucsa.212530 Cucumis sativus L. HOM04D002079 ORTHO04D012036 2.6e-15 87.4 195 28.2
Achn301471 Actinidia chinensis HOM04D004458 ORTHO04D005629 6.8e-11 72.8 53 66.0
Araip.S6LSH Arachis ipaensis HOM04D002079 ORTHO04D012036 1.5e-10 71.6 96 39.6
ZJU.LOC107433036 Ziziphus jujuba HOM04D005216 ORTHO04D007238 1.7e-09 68.2 497 19.3
MDO.mRNA.g.825.18 Malus domestica HOM04D002079 ORTHO04D002619 4.8e-09 66.6 114 48.2
Carubv10011584m.g Capsella rubella HOM04D005216 ORTHO04D007238 1.4e-08 65.1 160 25.0
THA.LOC104812205 Tarenaya hassleriana HOM04D005216 ORTHO04D007238 3.1e-08 63.9 148 27.7
AT1G17760 Arabidopsis thaliana HOM04D005216 ORTHO04D007238 9.1e-08 62.4 169 23.7
Tp1g15840 Schrenkiella parvula HOM04D005216 ORTHO04D007238 1.6e-07 61.6 163 25.8
Medtr6g026900 Medicago truncatula HOM04D005216 ORTHO04D007238 3.5e-07 60.5 162 22.8
COL.COLO4_04346 Corchorus olitorius HOM04D005216 ORTHO04D007238 4.5e-07 60.1 148 25.0
Brara.H02455 Brassica rapa HOM04D005216 ORTHO04D007238 4.5e-07 60.1 166 24.7
Bo8g067440 Brassica oleracea HOM04D005216 ORTHO04D007238 4.5e-07 60.1 166 24.7
Ca_19692.g Cicer arietinum HOM04D005216 ORTHO04D007238 7.7e-07 59.3 151 27.8
AL1G30120 Arabidopsis lyrata HOM04D005216 ORTHO04D007238 7.7e-07 59.3 121 28.9
Migut.N01206 Erythranthe guttata HOM04D005216 ORTHO04D007238 7.7e-07 59.3 175 25.7
Araip.SJB3E Arachis ipaensis HOM04D002079 ORTHO04D012036 1.0e-06 58.9 86 37.2
NNU_11416 Nelumbo nucifera HOM04D005216 ORTHO04D007238 2.2e-06 57.8 105 29.5
MDO.mRNA.g.4725.3 Malus domestica HOM04D002079 ORTHO04D145192 2.2e-06 57.8 64 60.9
Solyc10g050540.1 Solanum lycopersicum HOM04D005216 ORTHO04D007238 2.9e-06 57.4 142 24.6
Prupe.1G353000 Prunus persica HOM04D005216 ORTHO04D007238 3.8e-06 57.0 163 22.1
ATR0307G027 Amborella trichopoda HOM04D005216 ORTHO04D007238 3.8e-06 57.0 198 21.7

Actinidia chinensis (5 genes)
Amaranthus hypochondriacus (2 genes)
Amborella trichopoda (3 genes)
Arabidopsis lyrata (3 genes)
Arabidopsis thaliana (3 genes)
Arachis ipaensis (4 genes)
Beta vulgaris (4 genes)
Brassica oleracea (6 genes)
Brassica rapa (4 genes)
Cajanus cajan (2 genes)
Capsella rubella (3 genes)
Capsicum annuum (2 genes)
Carica papaya (2 genes)
Chenopodium quinoa (2 genes)
Chlamydomonas reinhardtii (1 genes)
Cicer arietinum (3 genes)
Citrullus lanatus (2 genes)
Citrus clementina (2 genes)
Coffea canephora (3 genes)
Corchorus olitorius (3 genes)
Cucumis melo (2 genes)
Cucumis sativus L. (2 genes)
Daucus carota (4 genes)
Erythranthe guttata (3 genes)
Eucalyptus grandis (3 genes)
Fragaria vesca (2 genes)
Glycine max (3 genes)
Gossypium raimondii (4 genes)
Hevea brasiliensis (4 genes)
Malus domestica (7 genes)
Manihot esculenta (2 genes)
Marchantia polymorpha (1 genes)
Medicago truncatula (3 genes)
Micromonas commoda (1 genes)
Nelumbo nucifera (3 genes)
Oryza sativa ssp. japonica (2 genes)
Petunia axillaris (2 genes)
Physcomitrium patens (3 genes)
Picea abies (1 genes)
Populus trichocarpa (2 genes)
Prunus persica (3 genes)
Pyrus bretschneideri (3 genes)
Ricinus communis (3 genes)
Schrenkiella parvula (4 genes)
Selaginella moellendorffii (2 genes)
Solanum lycopersicum (3 genes)
Solanum tuberosum (0 genes)
Tarenaya hassleriana (6 genes)
Theobroma cacao (2 genes)
Trifolium pratense (2 genes)
Utricularia gibba (2 genes)
Vigna radiata var. radiata (2 genes)
Vitis vinifera (4 genes)
Zea mays (4 genes)
Ziziphus jujuba (3 genes)

Program Settings