Functional clusters

Information

  • Type Gene Ontology
  • Description hydrolase activity, acting on glycosyl bonds

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Amborella trichopoda AmTr_v1.0_scaffold00095 3 CH_atr_310 11 77 0.000614072
Camellia sinensis var. sinensis Chr7 3 CH_camsi_185 8 11 0.00000000752671
Capsicum annuum PGAv.1.6.scaffold566 3 CH_can_327 9 36 0.000107963
Coffea canephora chr5 3 CH_ccan_105 5 13 0.000000719946
Erigeron canadensis Conyza_canadensis_scaffold:9 3 CH_eca_147 13 78 0.000000491276
Fragaria x ananassa Fvb3-3 3 CH_fan_26 16 37 0.0000000000000206879
Fragaria x ananassa Fvb1-2 3 CH_fan_394 8 22 0.0001301
Gossypium hirsutum A09 3 CH_ghi_281 6 6 0.00000140222
Helianthus annuus HanXRQChr03 3 CH_han_118 11 19 0.0000000000185326
Helianthus annuus HanXRQChr04 3 CH_han_280 11 39 0.00000031608
Nelumbo nucifera chr1 3 CH_nnu_154 5 5 0.0000107276
Oryza sativa ssp. japonica chr01 3 CH_osa_38 18 79 0.000000000000352387
Punica granatum NC_045128.1 3 CH_pgr_143 16 80 0.000000223013
Populus trichocarpa Chr19 3 CH_ptr_26 22 42 1.74978e-22
Quercus lobata 11 3 CH_qlo_290 18 57 0.000000000732828
Quercus lobata 7 3 CH_qlo_587 16 70 0.00000481713
Quercus lobata 8 3 CH_qlo_978 13 60 0.000527558
Rosa chinensis RcHm_v2.0_Chr1 3 CH_rch_175 11 22 0.000000000477572
Rosa chinensis RcHm_v2.0_Chr6 3 CH_rch_603 10 46 0.000122369
Sequoiadendron giganteum chr1 3 CH_sgi_788 16 65 0.00000399629
Sequoiadendron giganteum HRSCAF_1 3 CH_sgi_833 10 21 0.00000809634
Sapria himalayana scaffold37_5694058 3 CH_shi_229 5 24 0.00043476
Solanum lycopersicum SL4.0ch12 3 CH_sly_209 11 42 0.000000806959
Vanilla planifolia CM028157.1 3 CH_vpl_114 9 26 0.00000212584
Vitis vinifera chr18 3 CH_vvi_94 9 11 0.000000000251312
Amborella trichopoda AmTr_v1.0_scaffold00095 4 CH_atr_310 11 77 0.000614072
Camellia sinensis var. sinensis Chr7 4 CH_camsi_185 8 11 0.00000000752671
Capsicum annuum PGAv.1.6.scaffold566 4 CH_can_327 9 36 0.000107963
Coffea canephora chr5 4 CH_ccan_105 5 13 0.000000719946
Erigeron canadensis Conyza_canadensis_scaffold:9 4 CH_eca_147 13 78 0.000000491276
Fragaria x ananassa Fvb3-3 4 CH_fan_26 16 37 0.0000000000000206879
Fragaria x ananassa Fvb1-2 4 CH_fan_394 8 22 0.0001301
Gossypium hirsutum A09 4 CH_ghi_281 6 6 0.00000140222
Helianthus annuus HanXRQChr03 4 CH_han_118 11 19 0.0000000000185326
Helianthus annuus HanXRQChr04 4 CH_han_280 11 39 0.00000031608
Nelumbo nucifera chr1 4 CH_nnu_154 5 5 0.0000107276
Oryza sativa ssp. japonica chr01 4 CH_osa_38 18 79 0.000000000000352387
Punica granatum NC_045128.1 4 CH_pgr_143 16 80 0.000000223013
Populus trichocarpa Chr19 4 CH_ptr_26 22 42 1.74978e-22
Quercus lobata 11 4 CH_qlo_290 18 57 0.000000000732828
Quercus lobata 7 4 CH_qlo_587 16 70 0.00000481713
Quercus lobata 8 4 CH_qlo_978 13 60 0.000527558
Rosa chinensis RcHm_v2.0_Chr1 4 CH_rch_175 11 22 0.000000000477572
Rosa chinensis RcHm_v2.0_Chr6 4 CH_rch_603 10 46 0.000122369
Sequoiadendron giganteum chr1 4 CH_sgi_788 16 65 0.00000399629
Sequoiadendron giganteum HRSCAF_1 4 CH_sgi_833 10 21 0.00000809634
Sapria himalayana scaffold37_5694058 4 CH_shi_229 5 24 0.00043476
Solanum lycopersicum SL4.0ch12 4 CH_sly_209 11 42 0.000000806959
Vanilla planifolia CM028157.1 4 CH_vpl_114 9 26 0.00000212584
Vitis vinifera chr18 4 CH_vvi_94 9 11 0.000000000251312

Available child term results

Ontology identifier Description Number of clusters
GO:0000703 oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity 2
GO:0003796 lysozyme activity 56
GO:0003905 alkylbase DNA N-glycosylase activity 2
GO:0003953 NAD+ nucleosidase activity 602
GO:0004338 glucan exo-1,3-beta-glucosidase activity 6
GO:0004348 glucosylceramidase activity 2
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 420
GO:0004555 alpha,alpha-trehalase activity 46
GO:0004556 alpha-amylase activity 34
GO:0004557 alpha-galactosidase activity 12
GO:0004558 alpha-1,4-glucosidase activity 16
GO:0004560 alpha-L-fucosidase activity 38
GO:0004563 beta-N-acetylhexosaminidase activity 10
GO:0004565 beta-galactosidase activity 16
GO:0004566 beta-glucuronidase activity 12
GO:0004568 chitinase activity 22
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity 6
GO:0004573 mannosyl-oligosaccharide glucosidase activity 24
GO:0004575 sucrose alpha-glucosidase activity 2
GO:0004649 poly(ADP-ribose) glycohydrolase activity 50
GO:0004650 polygalacturonase activity 462
GO:0004844 uracil DNA N-glycosylase activity 10
GO:0008422 beta-glucosidase activity 8
GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity 6
GO:0008725 DNA-3-methyladenine glycosylase activity 2
GO:0008810 cellulase activity 58
GO:0008843 endochitinase activity 10
GO:0008930 methylthioadenosine nucleosidase activity 22
GO:0009044 xylan 1,4-beta-xylosidase activity 4
GO:0015926 glucosidase activity 2
GO:0015927 trehalase activity 6
GO:0016161 beta-amylase activity 40
GO:0016162 cellulose 1,4-beta-cellobiosidase activity 20
GO:0016231 beta-N-acetylglucosaminidase activity 12
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 6
GO:0016977 chitosanase activity 2
GO:0016985 mannan endo-1,4-beta-mannosidase activity 28
GO:0019137 thioglucosidase activity 26
GO:0019156 isoamylase activity 4
GO:0030598 rRNA N-glycosylase activity 46
GO:0031176 endo-1,4-beta-xylanase activity 20
GO:0031219 levanase activity 32
GO:0033919 glucan 1,3-alpha-glucosidase activity 6
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity 34
GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity 8
GO:0033946 xyloglucan-specific endo-beta-1,4-glucanase activity 30
GO:0033947 mannosylglycoprotein endo-beta-mannosidase activity 28
GO:0035885 exochitinase activity 40
GO:0042973 glucan endo-1,3-beta-D-glucosidase activity 20
GO:0046556 alpha-L-arabinofuranosidase activity 6
GO:0047513 1,2-alpha-L-fucosidase activity 20
GO:0047668 amygdalin beta-glucosidase activity 18
GO:0047701 beta-L-arabinosidase activity 14
GO:0047782 coniferin beta-glucosidase activity 40
GO:0050224 prunasin beta-glucosidase activity 4
GO:0051060 pullulanase activity 16
GO:0051118 glucan endo-1,3-alpha-glucosidase activity 2
GO:0051670 inulinase activity 6
GO:0052692 raffinose alpha-galactosidase activity 14
GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group 62
GO:0052862 glucan endo-1,4-beta-glucanase activity, C-3 substituted reducing group 8
GO:0071633 dihydroceramidase activity 6
GO:0080079 cellobiose glucosidase activity 8
GO:0080176 xyloglucan 1,6-alpha-xylosidase activity 30
GO:0102148 N-acetyl-beta-D-galactosaminidase activity 4
GO:0102483 scopolin beta-glucosidase activity 10

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001