Functional clusters

Information

  • Type Gene Ontology
  • Description glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 3 CH_arhy_11 13 14 1.02474e-38
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 3 CH_arhy_8 15 15 6.8933e-47
Brassica carinata Contig804 3 CH_bca_942 2 2 0.000769551
Brassica carinata ChrC04 3 CH_bca_943 2 2 0.000769551
Beta vulgaris Chr2_EL10_PGA_scaffold6 3 CH_bvu_132 3 6 0.00000719392
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_92 3 3 0.000000359875
Camellia sinensis var. sinensis Chr1 3 CH_camsi_405 3 12 0.00000693535
Capsicum annuum PGAv.1.6.scaffold497 3 CH_can_372 2 2 0.000247831
Cicer arietinum L. Ca_LG5_v3 3 CH_car_6 4 4 0.00000000000707269
Corylus avellana 5 3 CH_cav_127 3 4 0.000000352672
Carpinus fangiana Cfa03 3 CH_cfa_33 5 7 0.000000000000031092
Citrullus lanatus CG_Chr11 3 CH_cla_151 2 2 0.000532269
Erigeron canadensis Conyza_canadensis_scaffold:6 3 CH_eca_144 3 4 0.00000042281
Erigeron canadensis Conyza_canadensis_scaffold:2 3 CH_eca_169 3 6 0.00000211367
Eucalyptus grandis Chr09 3 CH_egr_121 6 8 3.02912e-18
Glycine max Gm08 3 CH_gma_104 4 8 0.00000000378766
Glycine max Gm13 3 CH_gma_185 3 3 0.000000356564
Lotus japonicus chr2 3 CH_lja_110 3 3 0.000000268461
Malus domestica Chr09 3 CH_mdo_96 4 4 0.0000000000809834
Medicago truncatula chr6 3 CH_mtr_15 10 13 7.73684e-28
Medicago truncatula chr6 3 CH_mtr_252 4 6 0.0000000276204
Petunia axillaris Peaxi162Scf01056 3 CH_pax_293 2 2 0.000422134
Pisum sativum chr1LG6 3 CH_psa_5 7 9 6.85522e-21
Phaseolus vulgaris Chr04 3 CH_pvu_131 3 3 0.000000283418
Phaseolus vulgaris Chr08 3 CH_pvu_132 3 3 0.000000283418
Rhododendron simsii chr10 3 CH_rsi_404 2 2 0.000193592
Sequoiadendron giganteum chr3 3 CH_sgi_1106 2 2 0.000146145
Solanum pennellii Spenn-ch02 3 CH_spe_378 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_scaf_204 3 CH_tpr_3 8 8 2.02038e-25
Vigna mungo CM024070.1 3 CH_vmu_101 3 3 0.000000526065
Vigna mungo CM024077.1 3 CH_vmu_47 4 6 0.00000000152921
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.04 4 CH_arhy_11 13 14 1.02474e-38
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.14 4 CH_arhy_8 15 15 6.8933e-47
Brassica carinata Contig804 4 CH_bca_942 2 2 0.000769551
Brassica carinata ChrC04 4 CH_bca_943 2 2 0.000769551
Beta vulgaris Chr2_EL10_PGA_scaffold6 4 CH_bvu_132 3 6 0.00000719392
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_92 3 3 0.000000359875
Camellia sinensis var. sinensis Chr1 4 CH_camsi_405 3 12 0.00000693535
Capsicum annuum PGAv.1.6.scaffold497 4 CH_can_372 2 2 0.000247831
Cicer arietinum L. Ca_LG5_v3 4 CH_car_6 4 4 0.00000000000707269
Corylus avellana 5 4 CH_cav_127 3 4 0.000000352672
Carpinus fangiana Cfa03 4 CH_cfa_33 5 7 0.000000000000031092
Citrullus lanatus CG_Chr11 4 CH_cla_151 2 2 0.000532269
Erigeron canadensis Conyza_canadensis_scaffold:6 4 CH_eca_144 3 4 0.00000042281
Erigeron canadensis Conyza_canadensis_scaffold:2 4 CH_eca_169 3 6 0.00000211367
Eucalyptus grandis Chr09 4 CH_egr_121 6 8 3.02912e-18
Glycine max Gm08 4 CH_gma_104 4 8 0.00000000378766
Glycine max Gm13 4 CH_gma_185 3 3 0.000000356564
Lotus japonicus chr2 4 CH_lja_110 3 3 0.000000268461
Malus domestica Chr09 4 CH_mdo_96 4 4 0.0000000000809834
Medicago truncatula chr6 4 CH_mtr_15 10 13 7.73684e-28
Medicago truncatula chr6 4 CH_mtr_252 4 6 0.0000000276204
Petunia axillaris Peaxi162Scf01056 4 CH_pax_293 2 2 0.000422134
Pisum sativum chr1LG6 4 CH_psa_5 7 9 6.85522e-21
Phaseolus vulgaris Chr04 4 CH_pvu_131 3 3 0.000000283418
Phaseolus vulgaris Chr08 4 CH_pvu_132 3 3 0.000000283418
Rhododendron simsii chr10 4 CH_rsi_404 2 2 0.000193592
Sequoiadendron giganteum chr3 4 CH_sgi_1106 2 2 0.000146145
Solanum pennellii Spenn-ch02 4 CH_spe_378 2 2 0.000266874
Trifolium pratense Tp57577_TGAC_v2_scaf_204 4 CH_tpr_3 8 8 2.02038e-25
Vigna mungo CM024070.1 4 CH_vmu_101 3 3 0.000000526065
Vigna mungo CM024077.1 4 CH_vmu_47 4 6 0.00000000152921

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001