Functional clusters
Information
- Type Gene Ontology
- Description glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 3 | CH_arhy_11 | 13 | 14 | 1.02474e-38 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 3 | CH_arhy_8 | 15 | 15 | 6.8933e-47 |
| Brassica carinata | Contig804 | 3 | CH_bca_942 | 2 | 2 | 0.000769551 |
| Brassica carinata | ChrC04 | 3 | CH_bca_943 | 2 | 2 | 0.000769551 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 3 | CH_bvu_132 | 3 | 6 | 0.00000719392 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 3 | CH_bvu_92 | 3 | 3 | 0.000000359875 |
| Camellia sinensis var. sinensis | Chr1 | 3 | CH_camsi_405 | 3 | 12 | 0.00000693535 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 3 | CH_can_372 | 2 | 2 | 0.000247831 |
| Cicer arietinum L. | Ca_LG5_v3 | 3 | CH_car_6 | 4 | 4 | 0.00000000000707269 |
| Corylus avellana | 5 | 3 | CH_cav_127 | 3 | 4 | 0.000000352672 |
| Carpinus fangiana | Cfa03 | 3 | CH_cfa_33 | 5 | 7 | 0.000000000000031092 |
| Citrullus lanatus | CG_Chr11 | 3 | CH_cla_151 | 2 | 2 | 0.000532269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 3 | CH_eca_144 | 3 | 4 | 0.00000042281 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 3 | CH_eca_169 | 3 | 6 | 0.00000211367 |
| Eucalyptus grandis | Chr09 | 3 | CH_egr_121 | 6 | 8 | 3.02912e-18 |
| Glycine max | Gm08 | 3 | CH_gma_104 | 4 | 8 | 0.00000000378766 |
| Glycine max | Gm13 | 3 | CH_gma_185 | 3 | 3 | 0.000000356564 |
| Lotus japonicus | chr2 | 3 | CH_lja_110 | 3 | 3 | 0.000000268461 |
| Malus domestica | Chr09 | 3 | CH_mdo_96 | 4 | 4 | 0.0000000000809834 |
| Medicago truncatula | chr6 | 3 | CH_mtr_15 | 10 | 13 | 7.73684e-28 |
| Medicago truncatula | chr6 | 3 | CH_mtr_252 | 4 | 6 | 0.0000000276204 |
| Petunia axillaris | Peaxi162Scf01056 | 3 | CH_pax_293 | 2 | 2 | 0.000422134 |
| Pisum sativum | chr1LG6 | 3 | CH_psa_5 | 7 | 9 | 6.85522e-21 |
| Phaseolus vulgaris | Chr04 | 3 | CH_pvu_131 | 3 | 3 | 0.000000283418 |
| Phaseolus vulgaris | Chr08 | 3 | CH_pvu_132 | 3 | 3 | 0.000000283418 |
| Rhododendron simsii | chr10 | 3 | CH_rsi_404 | 2 | 2 | 0.000193592 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_1106 | 2 | 2 | 0.000146145 |
| Solanum pennellii | Spenn-ch02 | 3 | CH_spe_378 | 2 | 2 | 0.000266874 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_204 | 3 | CH_tpr_3 | 8 | 8 | 2.02038e-25 |
| Vigna mungo | CM024070.1 | 3 | CH_vmu_101 | 3 | 3 | 0.000000526065 |
| Vigna mungo | CM024077.1 | 3 | CH_vmu_47 | 4 | 6 | 0.00000000152921 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.04 | 4 | CH_arhy_11 | 13 | 14 | 1.02474e-38 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.14 | 4 | CH_arhy_8 | 15 | 15 | 6.8933e-47 |
| Brassica carinata | Contig804 | 4 | CH_bca_942 | 2 | 2 | 0.000769551 |
| Brassica carinata | ChrC04 | 4 | CH_bca_943 | 2 | 2 | 0.000769551 |
| Beta vulgaris | Chr2_EL10_PGA_scaffold6 | 4 | CH_bvu_132 | 3 | 6 | 0.00000719392 |
| Beta vulgaris | Chr7_EL10_PGA_scaffold5 | 4 | CH_bvu_92 | 3 | 3 | 0.000000359875 |
| Camellia sinensis var. sinensis | Chr1 | 4 | CH_camsi_405 | 3 | 12 | 0.00000693535 |
| Capsicum annuum | PGAv.1.6.scaffold497 | 4 | CH_can_372 | 2 | 2 | 0.000247831 |
| Cicer arietinum L. | Ca_LG5_v3 | 4 | CH_car_6 | 4 | 4 | 0.00000000000707269 |
| Corylus avellana | 5 | 4 | CH_cav_127 | 3 | 4 | 0.000000352672 |
| Carpinus fangiana | Cfa03 | 4 | CH_cfa_33 | 5 | 7 | 0.000000000000031092 |
| Citrullus lanatus | CG_Chr11 | 4 | CH_cla_151 | 2 | 2 | 0.000532269 |
| Erigeron canadensis | Conyza_canadensis_scaffold:6 | 4 | CH_eca_144 | 3 | 4 | 0.00000042281 |
| Erigeron canadensis | Conyza_canadensis_scaffold:2 | 4 | CH_eca_169 | 3 | 6 | 0.00000211367 |
| Eucalyptus grandis | Chr09 | 4 | CH_egr_121 | 6 | 8 | 3.02912e-18 |
| Glycine max | Gm08 | 4 | CH_gma_104 | 4 | 8 | 0.00000000378766 |
| Glycine max | Gm13 | 4 | CH_gma_185 | 3 | 3 | 0.000000356564 |
| Lotus japonicus | chr2 | 4 | CH_lja_110 | 3 | 3 | 0.000000268461 |
| Malus domestica | Chr09 | 4 | CH_mdo_96 | 4 | 4 | 0.0000000000809834 |
| Medicago truncatula | chr6 | 4 | CH_mtr_15 | 10 | 13 | 7.73684e-28 |
| Medicago truncatula | chr6 | 4 | CH_mtr_252 | 4 | 6 | 0.0000000276204 |
| Petunia axillaris | Peaxi162Scf01056 | 4 | CH_pax_293 | 2 | 2 | 0.000422134 |
| Pisum sativum | chr1LG6 | 4 | CH_psa_5 | 7 | 9 | 6.85522e-21 |
| Phaseolus vulgaris | Chr04 | 4 | CH_pvu_131 | 3 | 3 | 0.000000283418 |
| Phaseolus vulgaris | Chr08 | 4 | CH_pvu_132 | 3 | 3 | 0.000000283418 |
| Rhododendron simsii | chr10 | 4 | CH_rsi_404 | 2 | 2 | 0.000193592 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_1106 | 2 | 2 | 0.000146145 |
| Solanum pennellii | Spenn-ch02 | 4 | CH_spe_378 | 2 | 2 | 0.000266874 |
| Trifolium pratense | Tp57577_TGAC_v2_scaf_204 | 4 | CH_tpr_3 | 8 | 8 | 2.02038e-25 |
| Vigna mungo | CM024070.1 | 4 | CH_vmu_101 | 3 | 3 | 0.000000526065 |
| Vigna mungo | CM024077.1 | 4 | CH_vmu_47 | 4 | 6 | 0.00000000152921 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |