Functional clusters
Information
- Type Gene Ontology
- Description xyloglucan-specific endo-beta-1,4-glucanase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 3 | CH_amhyb_182 | 2 | 2 | 0.000505051 |
| Camellia sinensis var. sinensis | Chr7 | 3 | CH_camsi_88 | 6 | 34 | 0.00000000000127346 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 3 | CH_eca_139 | 3 | 5 | 0.000000302 |
| Gossypium hirsutum | A05 | 3 | CH_ghi_647 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 3 | CH_ghi_648 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr09 | 3 | CH_gra_297 | 2 | 2 | 0.000321664 |
| Manihot esculenta | Chromosome14 | 3 | CH_mes_15 | 10 | 10 | 2.39523e-32 |
| Papaver somniferum | NC_039363.1 | 3 | CH_pso_104 | 4 | 5 | 0.00000000000257295 |
| Rhododendron simsii | chr01 | 3 | CH_rsi_187 | 3 | 3 | 0.0000000624652 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_1 | 25 | 51 | 2.40677e-68 |
| Selaginella moellendorffii | scaffold_20 | 3 | CH_smo_67 | 4 | 41 | 0.00000860616 |
| Solanum pennellii | Spenn-ch12 | 3 | CH_spe_474 | 2 | 2 | 0.00093406 |
| Selenicereus undatus | Scaffold_33677 | 3 | CH_sun_227 | 2 | 2 | 0.000726639 |
| Trochodendron aralioides | group10 | 3 | CH_tar_34 | 5 | 8 | 0.000000000000687375 |
| Vigna mungo | CM024074.1 | 3 | CH_vmu_25 | 4 | 4 | 0.00000000000404683 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_12 | 4 | CH_amhyb_182 | 2 | 2 | 0.000505051 |
| Camellia sinensis var. sinensis | Chr7 | 4 | CH_camsi_88 | 6 | 34 | 0.00000000000127346 |
| Erigeron canadensis | Conyza_canadensis_scaffold:3 | 4 | CH_eca_139 | 3 | 5 | 0.000000302 |
| Gossypium hirsutum | A05 | 4 | CH_ghi_647 | 2 | 2 | 0.000747644 |
| Gossypium hirsutum | D05 | 4 | CH_ghi_648 | 2 | 2 | 0.000747644 |
| Gossypium raimondii | Chr09 | 4 | CH_gra_297 | 2 | 2 | 0.000321664 |
| Manihot esculenta | Chromosome14 | 4 | CH_mes_15 | 10 | 10 | 2.39523e-32 |
| Papaver somniferum | NC_039363.1 | 4 | CH_pso_104 | 4 | 5 | 0.00000000000257295 |
| Rhododendron simsii | chr01 | 4 | CH_rsi_187 | 3 | 3 | 0.0000000624652 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_1 | 25 | 51 | 2.40677e-68 |
| Selaginella moellendorffii | scaffold_20 | 4 | CH_smo_67 | 4 | 41 | 0.00000860616 |
| Solanum pennellii | Spenn-ch12 | 4 | CH_spe_474 | 2 | 2 | 0.00093406 |
| Selenicereus undatus | Scaffold_33677 | 4 | CH_sun_227 | 2 | 2 | 0.000726639 |
| Trochodendron aralioides | group10 | 4 | CH_tar_34 | 5 | 8 | 0.000000000000687375 |
| Vigna mungo | CM024074.1 | 4 | CH_vmu_25 | 4 | 4 | 0.00000000000404683 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |