Functional clusters
Information
- Type Gene Ontology
- Description xyloglucan 1,6-alpha-xylosidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 3 | CH_amhyb_152 | 2 | 2 | 0.000252525 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 3 | CH_arhy_263 | 3 | 3 | 0.0000000752906 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 3 | CH_arhy_264 | 3 | 3 | 0.0000000752906 |
| Amborella trichopoda | AmTr_v1.0_scaffold00079 | 3 | CH_atr_283 | 2 | 4 | 0.000476607 |
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_729 | 2 | 3 | 0.000412677 |
| Ceratophyllum demersum | 8 | 3 | CH_cde_144 | 2 | 2 | 0.000236939 |
| Lotus japonicus | chr2 | 3 | CH_lja_96 | 3 | 3 | 0.0000000767031 |
| Manihot esculenta | Chromosome06 | 3 | CH_mes_322 | 2 | 2 | 0.000183189 |
| Marchantia polymorpha | scaffold_8 | 3 | CH_mpo_86 | 2 | 2 | 0.000110442 |
| Medicago truncatula | chr1 | 3 | CH_mtr_566 | 2 | 2 | 0.000123259 |
| Nelumbo nucifera | chr3 | 3 | CH_nnu_226 | 2 | 2 | 0.000144505 |
| Quercus lobata | 4 | 3 | CH_qlo_716 | 2 | 2 | 0.0000516289 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 3 | CH_rch_687 | 2 | 5 | 0.000398629 |
| Sequoiadendron giganteum | chr4 | 3 | CH_sgi_80 | 7 | 7 | 1.05291e-24 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 3 | CH_tpr_219 | 2 | 2 | 0.0000756974 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_7 | 4 | CH_amhyb_152 | 2 | 2 | 0.000252525 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.19 | 4 | CH_arhy_263 | 3 | 3 | 0.0000000752906 |
| Arachis hypogaea | arahy.Tifrunner.gnm1.Arahy.09 | 4 | CH_arhy_264 | 3 | 3 | 0.0000000752906 |
| Amborella trichopoda | AmTr_v1.0_scaffold00079 | 4 | CH_atr_283 | 2 | 4 | 0.000476607 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_729 | 2 | 3 | 0.000412677 |
| Ceratophyllum demersum | 8 | 4 | CH_cde_144 | 2 | 2 | 0.000236939 |
| Lotus japonicus | chr2 | 4 | CH_lja_96 | 3 | 3 | 0.0000000767031 |
| Manihot esculenta | Chromosome06 | 4 | CH_mes_322 | 2 | 2 | 0.000183189 |
| Marchantia polymorpha | scaffold_8 | 4 | CH_mpo_86 | 2 | 2 | 0.000110442 |
| Medicago truncatula | chr1 | 4 | CH_mtr_566 | 2 | 2 | 0.000123259 |
| Nelumbo nucifera | chr3 | 4 | CH_nnu_226 | 2 | 2 | 0.000144505 |
| Quercus lobata | 4 | 4 | CH_qlo_716 | 2 | 2 | 0.0000516289 |
| Rosa chinensis | RcHm_v2.0_Chr4 | 4 | CH_rch_687 | 2 | 5 | 0.000398629 |
| Sequoiadendron giganteum | chr4 | 4 | CH_sgi_80 | 7 | 7 | 1.05291e-24 |
| Trifolium pratense | Tp57577_TGAC_v2_LG1 | 4 | CH_tpr_219 | 2 | 2 | 0.0000756974 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |