Functional clusters

Information

  • Type Gene Ontology
  • Description amygdalin beta-glucosidase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr6 3 CH_acertr_354 2 3 0.000211484
Amborella trichopoda AmTr_v1.0_scaffold00005 3 CH_atr_83 3 3 0.0000000378665
Carpinus fangiana Cfa08 3 CH_cfa_250 2 3 0.000227195
Cardamine hirsuta Chr3 3 CH_chi_219 2 2 0.0000691204
Eucalyptus grandis Chr02 3 CH_egr_671 2 2 0.0000585274
Eutrema salsugineum scaffold_13 3 CH_esa_231 2 4 0.000456864
Quercus lobata 10 3 CH_qlo_700 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr7 3 CH_rch_104 4 4 0.000000000000190078
Sapria himalayana scaffold89_1656250 3 CH_shi_144 2 2 0.0000571804
Acer truncatum chr6 4 CH_acertr_354 2 3 0.000211484
Amborella trichopoda AmTr_v1.0_scaffold00005 4 CH_atr_83 3 3 0.0000000378665
Carpinus fangiana Cfa08 4 CH_cfa_250 2 3 0.000227195
Cardamine hirsuta Chr3 4 CH_chi_219 2 2 0.0000691204
Eucalyptus grandis Chr02 4 CH_egr_671 2 2 0.0000585274
Eutrema salsugineum scaffold_13 4 CH_esa_231 2 4 0.000456864
Quercus lobata 10 4 CH_qlo_700 2 2 0.0000516289
Rosa chinensis RcHm_v2.0_Chr7 4 CH_rch_104 4 4 0.000000000000190078
Sapria himalayana scaffold89_1656250 4 CH_shi_144 2 2 0.0000571804

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001