Functional clusters

Information

  • Type Gene Ontology
  • Description lysozyme activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 3 CH_acertr_35 4 4 0.00000000000105119
Avicennia marina ScioBoG_102841_HRSCAF_103114 3 CH_ama_65 2 2 0.0000862218
Cicer arietinum L. Ca_LG4_v3 3 CH_car_123 2 2 0.0000778301
Corylus avellana 11 3 CH_cav_21 7 16 1.46376e-18
Coffea canephora chr2 3 CH_ccan_379 2 6 0.00063882
Ceratophyllum demersum 9 3 CH_cde_8 6 26 0.000000000000444956
Carpinus fangiana Cfa06 3 CH_cfa_45 4 4 0.00000000000651664
Chenopodium quinoa C_Quinoa_Scaffold_1783 3 CH_cqu_394 2 2 0.000142146
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_421 2 2 0.000448722
Eucalyptus grandis Chr11 3 CH_egr_375 3 3 0.00000000513834
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_390 2 2 0.000154202
Magnolia biondii Chr07 3 CH_mbi_83 4 5 0.0000000000257743
Medicago truncatula chr1 3 CH_mtr_493 2 2 0.0000410863
Oryza sativa ssp. japonica chr01 3 CH_osa_464 2 3 0.000792184
Pisum sativum chr6LG2 3 CH_psa_234 2 2 0.0000521635
Papaver somniferum NC_039359.1 3 CH_pso_387 3 48 0.0000131619
Rhododendron simsii chr09 3 CH_rsi_169 3 4 0.0000000249853
Simmondsia chinensis GWHAASQ00000025 3 CH_sci_223 2 2 0.000255428
Sequoiadendron giganteum chr6 3 CH_sgi_30 14 58 1.12586e-34
Solanum lycopersicum SL4.0ch01 3 CH_sly_220 3 8 0.00000115725
Trochodendron aralioides group12 3 CH_tar_38 4 5 0.00000000000324613
Trifolium pratense Tp57577_TGAC_v2_scaf_292 3 CH_tpr_227 2 2 0.0000756974
Tripterygium wilfordii NC_052239.1 3 CH_twi_236 2 2 0.000167359
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_248 2 2 0.0000929238
Vanilla planifolia CM028150.1 3 CH_vpl_216 2 2 0.000073888
Vitis vinifera chr16 3 CH_vvi_119 3 3 0.0000000086787
Zea mays 7 3 CH_zma_104 3 3 0.000000219616
Zea mays 3 3 CH_zma_34 4 4 0.0000000000280745
Acer truncatum chr5 4 CH_acertr_35 4 4 0.00000000000105119
Avicennia marina ScioBoG_102841_HRSCAF_103114 4 CH_ama_65 2 2 0.0000862218
Cicer arietinum L. Ca_LG4_v3 4 CH_car_123 2 2 0.0000778301
Corylus avellana 11 4 CH_cav_21 7 16 1.46376e-18
Coffea canephora chr2 4 CH_ccan_379 2 6 0.00063882
Ceratophyllum demersum 9 4 CH_cde_8 6 26 0.000000000000444956
Carpinus fangiana Cfa06 4 CH_cfa_45 4 4 0.00000000000651664
Chenopodium quinoa C_Quinoa_Scaffold_1783 4 CH_cqu_394 2 2 0.000142146
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_421 2 2 0.000448722
Eucalyptus grandis Chr11 4 CH_egr_375 3 3 0.00000000513834
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_390 2 2 0.000154202
Magnolia biondii Chr07 4 CH_mbi_83 4 5 0.0000000000257743
Medicago truncatula chr1 4 CH_mtr_493 2 2 0.0000410863
Oryza sativa ssp. japonica chr01 4 CH_osa_464 2 3 0.000792184
Pisum sativum chr6LG2 4 CH_psa_234 2 2 0.0000521635
Papaver somniferum NC_039359.1 4 CH_pso_387 3 48 0.0000131619
Rhododendron simsii chr09 4 CH_rsi_169 3 4 0.0000000249853
Simmondsia chinensis GWHAASQ00000025 4 CH_sci_223 2 2 0.000255428
Sequoiadendron giganteum chr6 4 CH_sgi_30 14 58 1.12586e-34
Solanum lycopersicum SL4.0ch01 4 CH_sly_220 3 8 0.00000115725
Trochodendron aralioides group12 4 CH_tar_38 4 5 0.00000000000324613
Trifolium pratense Tp57577_TGAC_v2_scaf_292 4 CH_tpr_227 2 2 0.0000756974
Tripterygium wilfordii NC_052239.1 4 CH_twi_236 2 2 0.000167359
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_248 2 2 0.0000929238
Vanilla planifolia CM028150.1 4 CH_vpl_216 2 2 0.000073888
Vitis vinifera chr16 4 CH_vvi_119 3 3 0.0000000086787
Zea mays 7 4 CH_zma_104 3 3 0.000000219616
Zea mays 3 4 CH_zma_34 4 4 0.0000000000280745

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001