Functional clusters

Information

  • Type Gene Ontology
  • Description endo-1,4-beta-xylanase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Carica papaya supercontig_160 3 CH_cpa_152 2 2 0.0000950661
Eucalyptus grandis Chr06 3 CH_egr_757 2 2 0.000175582
Manihot esculenta Chromosome05 3 CH_mes_317 2 2 0.000183189
Olea europaea chr10 3 CH_oeu_268 2 4 0.000320256
Populus trichocarpa Chr02 3 CH_ptr_313 2 2 0.0000578001
Rhododendron simsii chr06 3 CH_rsi_342 2 2 0.0000645307
Salix brachista GWHAAZH00000002 3 CH_sbr_234 2 2 0.000063014
Solanum tuberosum ST4.03ch04 3 CH_stu_457 2 2 0.000153736
Trifolium pratense Tp57577_TGAC_v2_LG1 3 CH_tpr_271 2 2 0.000227092
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_215 2 2 0.0000929238
Carica papaya supercontig_160 4 CH_cpa_152 2 2 0.0000950661
Eucalyptus grandis Chr06 4 CH_egr_757 2 2 0.000175582
Manihot esculenta Chromosome05 4 CH_mes_317 2 2 0.000183189
Olea europaea chr10 4 CH_oeu_268 2 4 0.000320256
Populus trichocarpa Chr02 4 CH_ptr_313 2 2 0.0000578001
Rhododendron simsii chr06 4 CH_rsi_342 2 2 0.0000645307
Salix brachista GWHAAZH00000002 4 CH_sbr_234 2 2 0.000063014
Solanum tuberosum ST4.03ch04 4 CH_stu_457 2 2 0.000153736
Trifolium pratense Tp57577_TGAC_v2_LG1 4 CH_tpr_271 2 2 0.000227092
Vaccinium macrocarpon chr10_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_215 2 2 0.0000929238

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001