Functional clusters
Information
- Type Gene Ontology
- Description coniferin beta-glucosidase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 3 | CH_ama_54 | 2 | 2 | 0.0000862218 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_605 | 2 | 5 | 0.000859414 |
| Brassica carinata | ChrB04 | 3 | CH_bca_697 | 2 | 2 | 0.000213764 |
| Cardamine hirsuta | Chr2 | 3 | CH_chi_98 | 3 | 3 | 0.0000000286668 |
| Capsella rubella | scaffold_2 | 3 | CH_cru_97 | 3 | 3 | 0.0000000320764 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 3 | CH_eca_316 | 2 | 2 | 0.000134617 |
| Eucalyptus grandis | Chr08 | 3 | CH_egr_807 | 2 | 2 | 0.000351165 |
| Gossypium hirsutum | D10 | 3 | CH_ghi_464 | 2 | 2 | 0.000160209 |
| Gossypium raimondii | Chr10 | 3 | CH_gra_291 | 2 | 4 | 0.000321647 |
| Malus domestica | Chr10 | 3 | CH_mdo_468 | 2 | 2 | 0.000113763 |
| Oryza sativa ssp. japonica | chr04 | 3 | CH_osa_65 | 4 | 9 | 0.0000000000309323 |
| Populus trichocarpa | Chr04 | 3 | CH_ptr_146 | 3 | 3 | 0.00000000501143 |
| Quercus lobata | 5 | 3 | CH_qlo_325 | 3 | 3 | 0.00000000399842 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_214 | 5 | 7 | 0.0000000000000186278 |
| Schrenkiella parvula | ch2-2 | 3 | CH_spa_200 | 2 | 3 | 0.000708559 |
| Trochodendron aralioides | group0 | 3 | CH_tar_426 | 2 | 3 | 0.000540303 |
| Theobroma cacao | Chromosome_6 | 3 | CH_tca_114 | 3 | 3 | 0.00000000804614 |
| Utricularia gibba | unitig_26 | 3 | CH_ugi_57 | 2 | 2 | 0.0000820479 |
| Vanilla planifolia | CM028161.1 | 3 | CH_vpl_192 | 2 | 2 | 0.000073888 |
| Zea mays | 2 | 3 | CH_zma_350 | 2 | 4 | 0.000920285 |
| Avicennia marina | ScioBoG_18782_HRSCAF_18867 | 4 | CH_ama_54 | 2 | 2 | 0.0000862218 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_605 | 2 | 5 | 0.000859414 |
| Brassica carinata | ChrB04 | 4 | CH_bca_697 | 2 | 2 | 0.000213764 |
| Cardamine hirsuta | Chr2 | 4 | CH_chi_98 | 3 | 3 | 0.0000000286668 |
| Capsella rubella | scaffold_2 | 4 | CH_cru_97 | 3 | 3 | 0.0000000320764 |
| Erigeron canadensis | Conyza_canadensis_scaffold:5 | 4 | CH_eca_316 | 2 | 2 | 0.000134617 |
| Eucalyptus grandis | Chr08 | 4 | CH_egr_807 | 2 | 2 | 0.000351165 |
| Gossypium hirsutum | D10 | 4 | CH_ghi_464 | 2 | 2 | 0.000160209 |
| Gossypium raimondii | Chr10 | 4 | CH_gra_291 | 2 | 4 | 0.000321647 |
| Malus domestica | Chr10 | 4 | CH_mdo_468 | 2 | 2 | 0.000113763 |
| Oryza sativa ssp. japonica | chr04 | 4 | CH_osa_65 | 4 | 9 | 0.0000000000309323 |
| Populus trichocarpa | Chr04 | 4 | CH_ptr_146 | 3 | 3 | 0.00000000501143 |
| Quercus lobata | 5 | 4 | CH_qlo_325 | 3 | 3 | 0.00000000399842 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_214 | 5 | 7 | 0.0000000000000186278 |
| Schrenkiella parvula | ch2-2 | 4 | CH_spa_200 | 2 | 3 | 0.000708559 |
| Trochodendron aralioides | group0 | 4 | CH_tar_426 | 2 | 3 | 0.000540303 |
| Theobroma cacao | Chromosome_6 | 4 | CH_tca_114 | 3 | 3 | 0.00000000804614 |
| Utricularia gibba | unitig_26 | 4 | CH_ugi_57 | 2 | 2 | 0.0000820479 |
| Vanilla planifolia | CM028161.1 | 4 | CH_vpl_192 | 2 | 2 | 0.000073888 |
| Zea mays | 2 | 4 | CH_zma_350 | 2 | 4 | 0.000920285 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |