Functional clusters
Information
- Type Gene Ontology
- Description cellulase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aethionema arabicum | LG-10 | 3 | CH_aar_212 | 2 | 2 | 0.000273698 |
| Acer truncatum | chr1 | 3 | CH_acertr_189 | 3 | 8 | 0.00000166941 |
| Actinidia chinensis | Lachesis_group3 | 3 | CH_ach_176 | 2 | 2 | 0.000162964 |
| Arabidopsis lyrata | scaffold_5 | 3 | CH_aly_310 | 2 | 3 | 0.000594007 |
| Avicennia marina | ScioBoG_4119_HRSCAF_4138 | 3 | CH_ama_90 | 2 | 2 | 0.000258665 |
| Amborella trichopoda | AmTr_v1.0_scaffold00053 | 3 | CH_atr_121 | 3 | 6 | 0.000000757172 |
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_781 | 3 | 41 | 0.000670543 |
| Camellia sinensis var. sinensis | Chr10 | 3 | CH_camsi_792 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044372.1 | 3 | CH_cansat_71 | 4 | 9 | 0.00000000053501 |
| Coffea canephora | chr6 | 3 | CH_ccan_32 | 4 | 39 | 0.0000000000953298 |
| Carpinus fangiana | Cfa07 | 3 | CH_cfa_268 | 2 | 2 | 0.000227204 |
| Capsella rubella | scaffold_5 | 3 | CH_cru_322 | 2 | 3 | 0.000657999 |
| Davidia involucrata | GWHABJS00000015 | 3 | CH_din_172 | 3 | 9 | 0.00000315047 |
| Durio zibethinus | NW_019168481.1 | 3 | CH_dzi_102 | 4 | 5 | 0.000000078159 |
| Erythranthe guttata | scaffold_3 | 3 | CH_egut_334 | 2 | 2 | 0.000218444 |
| Gossypium hirsutum | A09 | 3 | CH_ghi_469 | 2 | 2 | 0.000160209 |
| Gossypium raimondii | Chr06 | 3 | CH_gra_257 | 2 | 2 | 0.000160832 |
| Hydrangea macrophylla | Hma1.2p1_0110F.1 | 3 | CH_hma_12 | 5 | 5 | 0.0000000000000068549 |
| Malus domestica | Chr14 | 3 | CH_mdo_179 | 3 | 3 | 0.0000000215706 |
| Marchantia polymorpha | scaffold_42 | 3 | CH_mpo_49 | 4 | 21 | 0.000000844005 |
| Nelumbo nucifera | chr7 | 3 | CH_nnu_26 | 5 | 10 | 0.000000000000213626 |
| Olea europaea | chr3 | 3 | CH_oeu_284 | 2 | 2 | 0.000320273 |
| Papaver somniferum | NC_039361.1 | 3 | CH_pso_69 | 5 | 8 | 0.0000000000000499838 |
| Sechium edule | LG08 | 3 | CH_sed_259 | 2 | 3 | 0.000642039 |
| Sequoiadendron giganteum | chr6 | 3 | CH_sgi_450 | 4 | 4 | 0.00000000253723 |
| Sequoiadendron giganteum | chr3 | 3 | CH_sgi_77 | 10 | 18 | 3.09432e-25 |
| Schrenkiella parvula | ch5-1 | 3 | CH_spa_162 | 2 | 2 | 0.000236202 |
| Trochodendron aralioides | group2 | 3 | CH_tar_46 | 4 | 4 | 0.0000000000454472 |
| Vanilla planifolia | CM028152.1 | 3 | CH_vpl_7 | 6 | 6 | 3.46985e-19 |
| Aethionema arabicum | LG-10 | 4 | CH_aar_212 | 2 | 2 | 0.000273698 |
| Acer truncatum | chr1 | 4 | CH_acertr_189 | 3 | 8 | 0.00000166941 |
| Actinidia chinensis | Lachesis_group3 | 4 | CH_ach_176 | 2 | 2 | 0.000162964 |
| Arabidopsis lyrata | scaffold_5 | 4 | CH_aly_310 | 2 | 3 | 0.000594007 |
| Avicennia marina | ScioBoG_4119_HRSCAF_4138 | 4 | CH_ama_90 | 2 | 2 | 0.000258665 |
| Amborella trichopoda | AmTr_v1.0_scaffold00053 | 4 | CH_atr_121 | 3 | 6 | 0.000000757172 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_781 | 3 | 41 | 0.000670543 |
| Camellia sinensis var. sinensis | Chr10 | 4 | CH_camsi_792 | 2 | 2 | 0.000687821 |
| Cannabis sativa | NC_044372.1 | 4 | CH_cansat_71 | 4 | 9 | 0.00000000053501 |
| Coffea canephora | chr6 | 4 | CH_ccan_32 | 4 | 39 | 0.0000000000953298 |
| Carpinus fangiana | Cfa07 | 4 | CH_cfa_268 | 2 | 2 | 0.000227204 |
| Capsella rubella | scaffold_5 | 4 | CH_cru_322 | 2 | 3 | 0.000657999 |
| Davidia involucrata | GWHABJS00000015 | 4 | CH_din_172 | 3 | 9 | 0.00000315047 |
| Durio zibethinus | NW_019168481.1 | 4 | CH_dzi_102 | 4 | 5 | 0.000000078159 |
| Erythranthe guttata | scaffold_3 | 4 | CH_egut_334 | 2 | 2 | 0.000218444 |
| Gossypium hirsutum | A09 | 4 | CH_ghi_469 | 2 | 2 | 0.000160209 |
| Gossypium raimondii | Chr06 | 4 | CH_gra_257 | 2 | 2 | 0.000160832 |
| Hydrangea macrophylla | Hma1.2p1_0110F.1 | 4 | CH_hma_12 | 5 | 5 | 0.0000000000000068549 |
| Malus domestica | Chr14 | 4 | CH_mdo_179 | 3 | 3 | 0.0000000215706 |
| Marchantia polymorpha | scaffold_42 | 4 | CH_mpo_49 | 4 | 21 | 0.000000844005 |
| Nelumbo nucifera | chr7 | 4 | CH_nnu_26 | 5 | 10 | 0.000000000000213626 |
| Olea europaea | chr3 | 4 | CH_oeu_284 | 2 | 2 | 0.000320273 |
| Papaver somniferum | NC_039361.1 | 4 | CH_pso_69 | 5 | 8 | 0.0000000000000499838 |
| Sechium edule | LG08 | 4 | CH_sed_259 | 2 | 3 | 0.000642039 |
| Sequoiadendron giganteum | chr6 | 4 | CH_sgi_450 | 4 | 4 | 0.00000000253723 |
| Sequoiadendron giganteum | chr3 | 4 | CH_sgi_77 | 10 | 18 | 3.09432e-25 |
| Schrenkiella parvula | ch5-1 | 4 | CH_spa_162 | 2 | 2 | 0.000236202 |
| Trochodendron aralioides | group2 | 4 | CH_tar_46 | 4 | 4 | 0.0000000000454472 |
| Vanilla planifolia | CM028152.1 | 4 | CH_vpl_7 | 6 | 6 | 3.46985e-19 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |