Functional clusters

Information

  • Type Gene Ontology
  • Description polygalacturonase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr4 3 CH_acertr_210 5 18 0.00000405056
Acer truncatum chr4 3 CH_acertr_242 4 7 0.00000991893
Acer truncatum chr3 3 CH_acertr_258 5 25 0.0000248696
Actinidia chinensis Lachesis_group27 3 CH_ach_151 4 12 0.000122976
Actinidia chinensis Lachesis_group17 3 CH_ach_23 5 6 0.00000000232838
Arabidopsis lyrata scaffold_7 3 CH_aly_262 3 3 0.000247157
Arabidopsis lyrata scaffold_3 3 CH_aly_263 3 3 0.000247157
Avicennia marina ScioBoG_102840_HRSCAF_103099 3 CH_ama_11 5 7 0.00000000206211
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 3 CH_amhyb_133 3 4 0.000190926
Aquilegia oxysepala CHR07 3 CH_aox_43 5 6 0.00000000227184
Arabidopsis thaliana Chr3 3 CH_ath_176 4 5 0.000000304707
Arabidopsis thaliana Chr1 3 CH_ath_582 3 5 0.000644132
Arabidopsis thaliana Chr2 3 CH_ath_583 3 5 0.000644132
Amborella trichopoda AmTr_v1.0_scaffold00019 3 CH_atr_122 6 35 0.000000784997
Amborella trichopoda AmTr_v1.0_scaffold00104 3 CH_atr_301 3 4 0.000500871
Amborella trichopoda AmTr_v1.0_scaffold00003 3 CH_atr_302 3 4 0.000500871
Brassica carinata ChrB04 3 CH_bca_140 5 5 0.00000000358591
Brassica carinata ChrB06 3 CH_bca_345 4 4 0.00000174735
Brassica carinata ChrB02 3 CH_bca_61 7 10 0.0000000000017746
Brassica carinata ChrC02 3 CH_bca_76 6 6 0.00000000000732076
Brassica carinata ChrC01 3 CH_bca_782 4 10 0.00036332
Brassica carinata ChrC05 3 CH_bca_861 4 11 0.000569989
Brassica carinata ChrC01 3 CH_bca_972 3 3 0.000847047
Brassica carinata ChrC06 3 CH_bca_973 3 3 0.000847047
Brassica napus A04 3 CH_bna_132 5 5 0.00000000382331
Brassica napus C04 3 CH_bna_133 5 5 0.00000000382331
Brassica napus C08 3 CH_bna_401 4 7 0.0000282527
Brassica napus A05 3 CH_bna_574 4 10 0.00039297
Brassica napus C03 3 CH_bna_678 4 12 0.000923273
Brassica napus A02 3 CH_bna_679 3 3 0.000929706
Brassica napus A05 3 CH_bna_680 3 3 0.000929706
Brassica napus C03 3 CH_bna_681 3 3 0.000929706
Brassica napus C07 3 CH_bna_682 3 3 0.000929706
Brassica oleracea C1 3 CH_bol_106 5 8 0.0000000640366
Brassica oleracea C8 3 CH_bol_342 3 4 0.000365265
Brassica oleracea C4 3 CH_bol_68 5 5 0.00000000114858
Brassica rapa A04 3 CH_bra_101 4 4 0.00000100883
Brassica rapa A02 3 CH_bra_266 3 3 0.000474701
Brassica rapa A03 3 CH_bra_290 4 13 0.000710326
Beta vulgaris Chr7_EL10_PGA_scaffold5 3 CH_bvu_139 4 7 0.0000115438
Beta vulgaris Chr3_EL10_PGA_scaffold7 3 CH_bvu_52 6 12 0.000000000983722
Camellia sinensis var. sinensis Chr10 3 CH_camsi_209 5 8 0.0000000207936
Camellia sinensis var. sinensis Contig795 3 CH_camsi_227 5 9 0.0000000467274
Camellia sinensis var. sinensis Chr8 3 CH_camsi_780 3 4 0.000660249
Cannabis sativa NC_044373.1 3 CH_cansat_136 4 4 0.000000691799
Cannabis sativa NC_044372.1 3 CH_cansat_196 4 8 0.0000480948
Cannabis sativa NC_044379.1 3 CH_cansat_92 5 6 0.0000000087074
Capsicum annuum PGAv.1.6.scaffold74 3 CH_can_278 3 3 0.0000670022
Capsicum annuum PGAv.1.6.scaffold566 3 CH_can_279 3 3 0.0000670022
Corylus avellana 9 3 CH_cav_361 3 4 0.000434757
Corylus avellana 5 3 CH_cav_84 5 7 0.00000000522669
Chara braunii BFEA01000114 3 CH_cbr_184 3 24 0.000876455
Coffea canephora chr3 3 CH_ccan_234 4 80 0.0000864813
Coffea canephora chr9 3 CH_ccan_26 6 60 0.0000000000279995
Coffea canephora chr3 3 CH_ccan_70 5 63 0.0000000373291
Citrus clementina scaffold_7 3 CH_ccl_214 5 20 0.00000144292
Ceratophyllum demersum 11 3 CH_cde_125 3 3 0.00019486
Carpinus fangiana Cfa06 3 CH_cfa_238 3 3 0.000106181
Carpinus fangiana Cfa06 3 CH_cfa_37 6 6 0.000000000000341898
Cardamine hirsuta Chr3 3 CH_chi_110 5 7 0.0000000618072
Cardamine hirsuta Chr1 3 CH_chi_349 3 3 0.000483931
Carya illinoinensis Chr03 3 CH_cil_22 10 10 9.14552e-23
Carya illinoinensis Chr11 3 CH_cil_293 4 6 0.0000136996
Carya illinoinensis Chr04 3 CH_cil_38 9 9 4.40336e-20
Citrullus lanatus CG_Chr08 3 CH_cla_51 4 4 0.000000482406
Cucumis melo chr04 3 CH_cme_249 3 3 0.000450783
Cucumis melo chr05 3 CH_cme_250 3 3 0.000450783
Cucumis melo chr01 3 CH_cme_92 7 34 0.0000000702168
Corchorus olitorius AWUE01014268.1 3 CH_col_61 3 4 0.0000843944
Carica papaya supercontig_30 3 CH_cpa_187 3 3 0.000114367
Chenopodium quinoa C_Quinoa_Scaffold_3876 3 CH_cqu_101 5 5 0.0000000011672
Chenopodium quinoa C_Quinoa_Scaffold_4480 3 CH_cqu_155 5 9 0.000000146138
Chenopodium quinoa C_Quinoa_Scaffold_1710 3 CH_cqu_452 3 3 0.000320886
Chenopodium quinoa C_Quinoa_Scaffold_2187 3 CH_cqu_84 6 9 0.000000000182634
Capsella rubella scaffold_3 3 CH_cru_137 4 4 0.000000698551
Capsella rubella scaffold_7 3 CH_cru_285 3 3 0.000318446
Cucumis sativus L. chr7 3 CH_csa_101 5 8 0.000000142496
Daucus carota DCARv2_Chr9 3 CH_dca_356 3 3 0.000482505
Daucus carota DCARv2_Chr8 3 CH_dca_357 3 3 0.000482505
Daucus carota DCARv2_Chr7 3 CH_dca_89 5 6 0.0000000167496
Davidia involucrata GWHABJS00000013 3 CH_din_15 10 14 4.01988e-21
Davidia involucrata GWHABJS00000009 3 CH_din_93 5 8 0.000000027285
Durio zibethinus NW_019167982.1 3 CH_dzi_332 3 4 0.000735817
Durio zibethinus NW_019168015.1 3 CH_dzi_39 6 6 0.000000000000689413
Durio zibethinus NW_019167938.1 3 CH_dzi_66 5 5 0.000000000450699
Durio zibethinus NW_019167982.1 3 CH_dzi_67 5 5 0.000000000450699
Erigeron canadensis Conyza_canadensis_scaffold:3 3 CH_eca_234 3 3 0.000029841
Erigeron canadensis Conyza_canadensis_scaffold:1 3 CH_eca_295 3 4 0.000119287
Eucalyptus grandis Chr08 3 CH_egr_228 6 6 0.00000000000105019
Eucalyptus grandis Chr11 3 CH_egr_326 5 5 0.000000000618671
Eucalyptus grandis Chr01 3 CH_egr_534 4 5 0.00000178895
Eucalyptus grandis Chr03 3 CH_egr_781 3 3 0.000204049
Eucalyptus grandis Chr06 3 CH_egr_782 3 3 0.000204049
Erythranthe guttata scaffold_7 3 CH_egut_139 6 15 0.0000000154133
Erythranthe guttata scaffold_9 3 CH_egut_355 3 3 0.000315831
Erythranthe guttata scaffold_8 3 CH_egut_356 3 3 0.000315831
Erythranthe guttata scaffold_13 3 CH_egut_68 6 6 0.00000000000313037
Fragaria x ananassa Fvb6-3 3 CH_fan_397 6 53 0.000140032
Fragaria x ananassa Fvb1-2 3 CH_fan_555 3 3 0.000862599
Fragaria vesca Fvb1 3 CH_fve_322 3 3 0.000297535
Gossypium hirsutum A02 3 CH_ghi_22 12 12 9.41313e-28
Gossypium hirsutum A04 3 CH_ghi_31 14 43 3.08288e-22
Gossypium hirsutum A09 3 CH_ghi_389 4 6 0.0000286706
Gossypium hirsutum A13 3 CH_ghi_512 4 9 0.000239545
Gossypium hirsutum A07 3 CH_ghi_630 5 30 0.000578466
Gossypium hirsutum A10 3 CH_ghi_668 3 3 0.000860328
Gossypium hirsutum D09 3 CH_ghi_669 3 3 0.000860328
Gossypium hirsutum D10 3 CH_ghi_670 3 3 0.000860328
Glycine max Gm10 3 CH_gma_417 3 3 0.000371043
Glycine max Gm04 3 CH_gma_418 3 3 0.000371043
Gossypium raimondii Chr13 3 CH_gra_135 5 11 0.000000369378
Gossypium raimondii Chr11 3 CH_gra_283 3 3 0.000246411
Gossypium raimondii Chr11 3 CH_gra_284 3 3 0.000246411
Helianthus annuus HanXRQChr13 3 CH_han_14 15 59 2.70341e-25
Helianthus annuus HanXRQChr10 3 CH_han_348 5 17 0.00000229896
Helianthus annuus HanXRQChr02 3 CH_han_54 7 7 7.60332e-16
Hydrangea macrophylla Hma1.2p1_0036F.1 3 CH_hma_124 3 3 0.0000374669
Hydrangea macrophylla Hma1.2p1_0108F.1 3 CH_hma_314 3 6 0.000747248
Lupinus albus Lalb_Chr17 3 CH_lal_170 4 4 0.00000356272
Lupinus albus Lalb_Chr19 3 CH_lal_208 5 14 0.0000212216
Lupinus albus Lalb_Chr17 3 CH_lal_22 8 8 2.90443e-16
Lupinus albus Lalb_Chr07 3 CH_lal_50 7 10 0.0000000000116598
Lupinus albus Lalb_Chr11 3 CH_lal_70 7 15 0.000000000617107
Lupinus albus Lalb_Chr04 3 CH_lal_78 6 9 0.00000000272825
Lupinus albus Lalb_Chr14 3 CH_lal_86 5 5 0.0000000108457
Lotus japonicus chr3 3 CH_lja_138 4 4 0.0000012623
Lotus japonicus chr6 3 CH_lja_335 3 3 0.00049722
Lonicera japonica GWHAAZE00000008 3 CH_lonja_136 6 6 0.0000000000123629
Lonicera japonica GWHAAZE00000003 3 CH_lonja_50 9 9 2.03924e-19
Lonicera japonica GWHAAZE00000006 3 CH_lonja_59 10 16 4.00477e-18
Lonicera japonica GWHAAZE00000104 3 CH_lonja_66 10 19 4.5885e-17
Lonicera japonica GWHAAZE00000001 3 CH_lonja_87 8 11 0.0000000000000132838
Lactuca sativa Lsat_1_v8_lg_7 3 CH_lsa_121 6 14 0.000000000871894
Lactuca sativa Lsat_1_v8_lg_6 3 CH_lsa_143 5 8 0.0000000122354
Lactuca sativa Lsat_1_v8_lg_6 3 CH_lsa_95 6 10 0.0000000000612527
Magnolia biondii Chr07 3 CH_mbi_129 7 27 0.00000000145361
Magnolia biondii Chr10 3 CH_mbi_191 5 9 0.0000000785367
Magnolia biondii Chr18 3 CH_mbi_201 7 49 0.000000136261
Magnolia biondii Chr18 3 CH_mbi_438 4 10 0.0000779136
Magnolia biondii Chr02 3 CH_mbi_508 3 3 0.000220055
Malus domestica Chr09 3 CH_mdo_245 4 4 0.000000364163
Malus domestica Chr00 3 CH_mdo_553 3 3 0.000228638
Malus domestica Chr00 3 CH_mdo_554 3 3 0.000228638
Malus domestica Chr16 3 CH_mdo_727 3 4 0.000913442
Manihot esculenta Chromosome09 3 CH_mes_181 6 9 0.000000345742
Manihot esculenta Chromosome11 3 CH_mes_24 13 13 3.12586e-24
Manihot esculenta Chromosome01 3 CH_mes_289 4 4 0.0000846085
Manihot esculenta Chromosome16 3 CH_mes_290 4 4 0.0000846085
Manihot esculenta Chromosome09 3 CH_mes_32 20 77 1.92519e-21
Manihot esculenta Chromosome07 3 CH_mes_6 30 30 2.26626e-61
Manihot esculenta Chromosome05 3 CH_mes_86 8 9 0.00000000000182517
Marchantia polymorpha scaffold_160 3 CH_mpo_22 4 4 0.000000000509296
Medicago truncatula chr8 3 CH_mtr_123 6 7 0.0000000000059778
Medicago truncatula chr1 3 CH_mtr_400 4 6 0.00000517963
Nelumbo nucifera chr1 3 CH_nnu_10 12 15 1.06601e-26
Nelumbo nucifera chr1 3 CH_nnu_146 5 18 0.00000627258
Olea europaea chr6 3 CH_oeu_5 9 9 5.945e-22
Petunia axillaris Peaxi162Scf00073 3 CH_pax_225 3 3 0.000112714
Petunia axillaris Peaxi162Scf00046 3 CH_pax_88 5 13 0.00000032106
Punica granatum NC_045128.1 3 CH_pgr_125 5 8 0.0000000419182
Punica granatum NC_045128.1 3 CH_pgr_389 3 4 0.000836728
Prunus persica Pp03 3 CH_ppe_17 11 11 7.60819e-24
Prunus persica Pp03 3 CH_ppe_205 5 7 0.000000201405
Prunus persica Pp04 3 CH_ppe_292 4 6 0.0000453788
Prunus persica Pp02 3 CH_ppe_341 6 39 0.0000901869
Prunus persica Pp07 3 CH_ppe_482 3 3 0.000947943
Prunus persica Pp01 3 CH_ppe_483 3 3 0.000947943
Pisum sativum chr1LG6 3 CH_psa_153 5 21 0.00000423928
Papaver somniferum NC_039358.1 3 CH_pso_100 8 30 0.00000000000217586
Papaver somniferum NW_020620714.1 3 CH_pso_60 9 31 0.00000000000000861147
Populus trichocarpa Chr07 3 CH_ptr_231 4 4 0.000000963897
Populus trichocarpa Chr03 3 CH_ptr_342 4 9 0.000120356
Populus trichocarpa Chr17 3 CH_ptr_41 11 29 6.58658e-18
Phaseolus vulgaris Chr10 3 CH_pvu_17 12 25 2.91478e-21
Phaseolus vulgaris Chr07 3 CH_pvu_37 8 9 2.41916e-16
Quercus lobata 10 3 CH_qlo_119 10 23 1.18051e-16
Quercus lobata 8 3 CH_qlo_265 6 8 0.000000000143383
Quercus lobata 4 3 CH_qlo_410 5 7 0.000000049007
Quercus lobata 4 3 CH_qlo_520 4 4 0.00000105501
Quercus lobata 4 3 CH_qlo_542 6 28 0.0000018578
Quercus lobata 9 3 CH_qlo_591 4 5 0.00000526554
Quercus lobata 8 3 CH_qlo_946 3 3 0.000469734
Rosa chinensis RcHm_v2.0_Chr4 3 CH_rch_179 6 12 0.000000000727352
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_264 5 9 0.0000000647938
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_295 5 11 0.00000023696
Rosa chinensis RcHm_v2.0_Chr2 3 CH_rch_774 3 4 0.00084346
Rhododendron simsii chr02 3 CH_rsi_192 4 4 0.0000000736819
Rhododendron simsii chr08 3 CH_rsi_319 4 11 0.0000241519
Salvia bowleyana GWHASIU00000005 3 CH_sbo_144 5 8 0.00000000685534
Salvia bowleyana GWHASIU00000002 3 CH_sbo_208 4 5 0.000000518424
Salvia bowleyana GWHASIU00000007 3 CH_sbo_392 4 16 0.000186705
Salix brachista GWHAAZH00000017 3 CH_sbr_103 5 7 0.0000000135251
Salix brachista GWHAAZH00000003 3 CH_sbr_144 4 4 0.000000366073
Salix brachista GWHAAZH00000019 3 CH_sbr_45 6 6 0.00000000000111951
Simmondsia chinensis GWHAASQ00000023 3 CH_sci_111 4 7 0.0000105304
Simmondsia chinensis GWHAASQ00000001 3 CH_sci_185 3 3 0.000165073
Sechium edule LG10 3 CH_sed_124 6 27 0.00000278703
Sechium edule LG05 3 CH_sed_257 3 3 0.000558484
Sechium edule LG06 3 CH_sed_32 12 80 0.000000000000116689
Sequoiadendron giganteum chr2 3 CH_sgi_1155 3 3 0.000155494
Sequoiadendron giganteum chr1 3 CH_sgi_1318 3 4 0.000621255
Sequoiadendron giganteum chr7 3 CH_sgi_32 15 22 1.18955e-33
Sequoiadendron giganteum chr4 3 CH_sgi_379 6 10 0.000000000106566
Solanum lycopersicum SL4.0ch02 3 CH_sly_449 3 3 0.000176837
Solanum lycopersicum SL4.0ch12 3 CH_sly_94 6 10 0.000000000163912
Schrenkiella parvula ch7-5 3 CH_spa_175 3 3 0.000351685
Schrenkiella parvula ch3-1 3 CH_spa_176 3 3 0.000351685
Schrenkiella parvula ch4-6 3 CH_spa_26 5 5 0.00000000186545
Solanum pennellii Spenn-ch12 3 CH_spe_210 5 27 0.00000492802
Solanum tuberosum ST4.03ch12 3 CH_stu_108 6 8 0.00000000000721448
Solanum tuberosum ST4.03ch02 3 CH_stu_203 4 4 0.000000148294
Trochodendron aralioides group10 3 CH_tar_229 4 9 0.0000158313
Theobroma cacao Chromosome_5 3 CH_tca_293 3 3 0.000106563
Theobroma cacao Chromosome_1 3 CH_tca_353 3 4 0.000425756
Tarenaya hassleriana NW_010971389.1 3 CH_tha_149 3 3 0.000366757
Tarenaya hassleriana NW_010965304.1 3 CH_tha_150 3 3 0.000366757
Tarenaya hassleriana NW_010966177.1 3 CH_tha_57 4 4 0.000000832608
Tarenaya hassleriana NW_010960188.1 3 CH_tha_58 4 4 0.000000832608
Trifolium pratense Tp57577_TGAC_v2_scaf_587 3 CH_tpr_114 4 4 0.00000126449
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_21 7 8 0.00000000000015738
Trifolium pratense Tp57577_TGAC_v2_LG5 3 CH_tpr_342 3 3 0.000491274
Tripterygium wilfordii NC_052244.1 3 CH_twi_104 5 9 0.0000000878992
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_111 5 11 0.000000147577
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_261 3 3 0.000118376
Vigna mungo CM024078.1 3 CH_vmu_5 10 17 2.88109e-19
Vanilla planifolia CM028150.1 3 CH_vpl_40 5 5 0.000000000426361
Vanilla planifolia CM028153.1 3 CH_vpl_59 6 17 0.00000000844755
Vitis vinifera chr9 3 CH_vvi_201 4 5 0.00000418679
Vitis vinifera chr12 3 CH_vvi_57 8 13 0.0000000000000261986
Zea mays 6 3 CH_zma_2 18 23 1.25322e-42
Zea mays 5 3 CH_zma_86 5 9 0.0000000574288
Acer truncatum chr4 4 CH_acertr_210 5 18 0.00000405056
Acer truncatum chr4 4 CH_acertr_242 4 7 0.00000991893
Acer truncatum chr3 4 CH_acertr_258 5 25 0.0000248696
Actinidia chinensis Lachesis_group27 4 CH_ach_151 4 12 0.000122976
Actinidia chinensis Lachesis_group17 4 CH_ach_23 5 6 0.00000000232838
Arabidopsis lyrata scaffold_7 4 CH_aly_262 3 3 0.000247157
Arabidopsis lyrata scaffold_3 4 CH_aly_263 3 3 0.000247157
Avicennia marina ScioBoG_102840_HRSCAF_103099 4 CH_ama_11 5 7 0.00000000206211
Amaranthus hybridus AmaHy_arrow1_Scaffold_7 4 CH_amhyb_133 3 4 0.000190926
Aquilegia oxysepala CHR07 4 CH_aox_43 5 6 0.00000000227184
Arabidopsis thaliana Chr3 4 CH_ath_176 4 5 0.000000304707
Arabidopsis thaliana Chr1 4 CH_ath_582 3 5 0.000644132
Arabidopsis thaliana Chr2 4 CH_ath_583 3 5 0.000644132
Amborella trichopoda AmTr_v1.0_scaffold00019 4 CH_atr_122 6 35 0.000000784997
Amborella trichopoda AmTr_v1.0_scaffold00104 4 CH_atr_301 3 4 0.000500871
Amborella trichopoda AmTr_v1.0_scaffold00003 4 CH_atr_302 3 4 0.000500871
Brassica carinata ChrB04 4 CH_bca_140 5 5 0.00000000358591
Brassica carinata ChrB06 4 CH_bca_345 4 4 0.00000174735
Brassica carinata ChrB02 4 CH_bca_61 7 10 0.0000000000017746
Brassica carinata ChrC02 4 CH_bca_76 6 6 0.00000000000732076
Brassica carinata ChrC01 4 CH_bca_782 4 10 0.00036332
Brassica carinata ChrC05 4 CH_bca_861 4 11 0.000569989
Brassica carinata ChrC01 4 CH_bca_972 3 3 0.000847047
Brassica carinata ChrC06 4 CH_bca_973 3 3 0.000847047
Brassica napus A04 4 CH_bna_132 5 5 0.00000000382331
Brassica napus C04 4 CH_bna_133 5 5 0.00000000382331
Brassica napus C08 4 CH_bna_401 4 7 0.0000282527
Brassica napus A05 4 CH_bna_574 4 10 0.00039297
Brassica napus C03 4 CH_bna_678 4 12 0.000923273
Brassica napus A02 4 CH_bna_679 3 3 0.000929706
Brassica napus A05 4 CH_bna_680 3 3 0.000929706
Brassica napus C03 4 CH_bna_681 3 3 0.000929706
Brassica napus C07 4 CH_bna_682 3 3 0.000929706
Brassica oleracea C1 4 CH_bol_106 5 8 0.0000000640366
Brassica oleracea C8 4 CH_bol_342 3 4 0.000365265
Brassica oleracea C4 4 CH_bol_68 5 5 0.00000000114858
Brassica rapa A04 4 CH_bra_101 4 4 0.00000100883
Brassica rapa A02 4 CH_bra_266 3 3 0.000474701
Brassica rapa A03 4 CH_bra_290 4 13 0.000710326
Beta vulgaris Chr7_EL10_PGA_scaffold5 4 CH_bvu_139 4 7 0.0000115438
Beta vulgaris Chr3_EL10_PGA_scaffold7 4 CH_bvu_52 6 12 0.000000000983722
Camellia sinensis var. sinensis Chr10 4 CH_camsi_209 5 8 0.0000000207936
Camellia sinensis var. sinensis Contig795 4 CH_camsi_227 5 9 0.0000000467274
Camellia sinensis var. sinensis Chr8 4 CH_camsi_780 3 4 0.000660249
Cannabis sativa NC_044373.1 4 CH_cansat_136 4 4 0.000000691799
Cannabis sativa NC_044372.1 4 CH_cansat_196 4 8 0.0000480948
Cannabis sativa NC_044379.1 4 CH_cansat_92 5 6 0.0000000087074
Capsicum annuum PGAv.1.6.scaffold74 4 CH_can_278 3 3 0.0000670022
Capsicum annuum PGAv.1.6.scaffold566 4 CH_can_279 3 3 0.0000670022
Corylus avellana 9 4 CH_cav_361 3 4 0.000434757
Corylus avellana 5 4 CH_cav_84 5 7 0.00000000522669
Chara braunii BFEA01000114 4 CH_cbr_184 3 24 0.000876455
Coffea canephora chr3 4 CH_ccan_234 4 80 0.0000864813
Coffea canephora chr9 4 CH_ccan_26 6 60 0.0000000000279995
Coffea canephora chr3 4 CH_ccan_70 5 63 0.0000000373291
Citrus clementina scaffold_7 4 CH_ccl_214 5 20 0.00000144292
Ceratophyllum demersum 11 4 CH_cde_125 3 3 0.00019486
Carpinus fangiana Cfa06 4 CH_cfa_238 3 3 0.000106181
Carpinus fangiana Cfa06 4 CH_cfa_37 6 6 0.000000000000341898
Cardamine hirsuta Chr3 4 CH_chi_110 5 7 0.0000000618072
Cardamine hirsuta Chr1 4 CH_chi_349 3 3 0.000483931
Carya illinoinensis Chr03 4 CH_cil_22 10 10 9.14552e-23
Carya illinoinensis Chr11 4 CH_cil_293 4 6 0.0000136996
Carya illinoinensis Chr04 4 CH_cil_38 9 9 4.40336e-20
Citrullus lanatus CG_Chr08 4 CH_cla_51 4 4 0.000000482406
Cucumis melo chr04 4 CH_cme_249 3 3 0.000450783
Cucumis melo chr05 4 CH_cme_250 3 3 0.000450783
Cucumis melo chr01 4 CH_cme_92 7 34 0.0000000702168
Corchorus olitorius AWUE01014268.1 4 CH_col_61 3 4 0.0000843944
Carica papaya supercontig_30 4 CH_cpa_187 3 3 0.000114367
Chenopodium quinoa C_Quinoa_Scaffold_3876 4 CH_cqu_101 5 5 0.0000000011672
Chenopodium quinoa C_Quinoa_Scaffold_4480 4 CH_cqu_155 5 9 0.000000146138
Chenopodium quinoa C_Quinoa_Scaffold_1710 4 CH_cqu_452 3 3 0.000320886
Chenopodium quinoa C_Quinoa_Scaffold_2187 4 CH_cqu_84 6 9 0.000000000182634
Capsella rubella scaffold_3 4 CH_cru_137 4 4 0.000000698551
Capsella rubella scaffold_7 4 CH_cru_285 3 3 0.000318446
Cucumis sativus L. chr7 4 CH_csa_101 5 8 0.000000142496
Daucus carota DCARv2_Chr9 4 CH_dca_356 3 3 0.000482505
Daucus carota DCARv2_Chr8 4 CH_dca_357 3 3 0.000482505
Daucus carota DCARv2_Chr7 4 CH_dca_89 5 6 0.0000000167496
Davidia involucrata GWHABJS00000013 4 CH_din_15 10 14 4.01988e-21
Davidia involucrata GWHABJS00000009 4 CH_din_93 5 8 0.000000027285
Durio zibethinus NW_019167982.1 4 CH_dzi_332 3 4 0.000735817
Durio zibethinus NW_019168015.1 4 CH_dzi_39 6 6 0.000000000000689413
Durio zibethinus NW_019167938.1 4 CH_dzi_66 5 5 0.000000000450699
Durio zibethinus NW_019167982.1 4 CH_dzi_67 5 5 0.000000000450699
Erigeron canadensis Conyza_canadensis_scaffold:3 4 CH_eca_234 3 3 0.000029841
Erigeron canadensis Conyza_canadensis_scaffold:1 4 CH_eca_295 3 4 0.000119287
Eucalyptus grandis Chr08 4 CH_egr_228 6 6 0.00000000000105019
Eucalyptus grandis Chr11 4 CH_egr_326 5 5 0.000000000618671
Eucalyptus grandis Chr01 4 CH_egr_534 4 5 0.00000178895
Eucalyptus grandis Chr03 4 CH_egr_781 3 3 0.000204049
Eucalyptus grandis Chr06 4 CH_egr_782 3 3 0.000204049
Erythranthe guttata scaffold_7 4 CH_egut_139 6 15 0.0000000154133
Erythranthe guttata scaffold_9 4 CH_egut_355 3 3 0.000315831
Erythranthe guttata scaffold_8 4 CH_egut_356 3 3 0.000315831
Erythranthe guttata scaffold_13 4 CH_egut_68 6 6 0.00000000000313037
Fragaria x ananassa Fvb6-3 4 CH_fan_397 6 53 0.000140032
Fragaria x ananassa Fvb1-2 4 CH_fan_555 3 3 0.000862599
Fragaria vesca Fvb1 4 CH_fve_322 3 3 0.000297535
Gossypium hirsutum A02 4 CH_ghi_22 12 12 9.41313e-28
Gossypium hirsutum A04 4 CH_ghi_31 14 43 3.08288e-22
Gossypium hirsutum A09 4 CH_ghi_389 4 6 0.0000286706
Gossypium hirsutum A13 4 CH_ghi_512 4 9 0.000239545
Gossypium hirsutum A07 4 CH_ghi_630 5 30 0.000578466
Gossypium hirsutum A10 4 CH_ghi_668 3 3 0.000860328
Gossypium hirsutum D09 4 CH_ghi_669 3 3 0.000860328
Gossypium hirsutum D10 4 CH_ghi_670 3 3 0.000860328
Glycine max Gm10 4 CH_gma_417 3 3 0.000371043
Glycine max Gm04 4 CH_gma_418 3 3 0.000371043
Gossypium raimondii Chr13 4 CH_gra_135 5 11 0.000000369378
Gossypium raimondii Chr11 4 CH_gra_283 3 3 0.000246411
Gossypium raimondii Chr11 4 CH_gra_284 3 3 0.000246411
Helianthus annuus HanXRQChr13 4 CH_han_14 15 59 2.70341e-25
Helianthus annuus HanXRQChr10 4 CH_han_348 5 17 0.00000229896
Helianthus annuus HanXRQChr02 4 CH_han_54 7 7 7.60332e-16
Hydrangea macrophylla Hma1.2p1_0036F.1 4 CH_hma_124 3 3 0.0000374669
Hydrangea macrophylla Hma1.2p1_0108F.1 4 CH_hma_314 3 6 0.000747248
Lupinus albus Lalb_Chr17 4 CH_lal_170 4 4 0.00000356272
Lupinus albus Lalb_Chr19 4 CH_lal_208 5 14 0.0000212216
Lupinus albus Lalb_Chr17 4 CH_lal_22 8 8 2.90443e-16
Lupinus albus Lalb_Chr07 4 CH_lal_50 7 10 0.0000000000116598
Lupinus albus Lalb_Chr11 4 CH_lal_70 7 15 0.000000000617107
Lupinus albus Lalb_Chr04 4 CH_lal_78 6 9 0.00000000272825
Lupinus albus Lalb_Chr14 4 CH_lal_86 5 5 0.0000000108457
Lotus japonicus chr3 4 CH_lja_138 4 4 0.0000012623
Lotus japonicus chr6 4 CH_lja_335 3 3 0.00049722
Lonicera japonica GWHAAZE00000008 4 CH_lonja_136 6 6 0.0000000000123629
Lonicera japonica GWHAAZE00000003 4 CH_lonja_50 9 9 2.03924e-19
Lonicera japonica GWHAAZE00000006 4 CH_lonja_59 10 16 4.00477e-18
Lonicera japonica GWHAAZE00000104 4 CH_lonja_66 10 19 4.5885e-17
Lonicera japonica GWHAAZE00000001 4 CH_lonja_87 8 11 0.0000000000000132838
Lactuca sativa Lsat_1_v8_lg_7 4 CH_lsa_121 6 14 0.000000000871894
Lactuca sativa Lsat_1_v8_lg_6 4 CH_lsa_143 5 8 0.0000000122354
Lactuca sativa Lsat_1_v8_lg_6 4 CH_lsa_95 6 10 0.0000000000612527
Magnolia biondii Chr07 4 CH_mbi_129 7 27 0.00000000145361
Magnolia biondii Chr10 4 CH_mbi_191 5 9 0.0000000785367
Magnolia biondii Chr18 4 CH_mbi_201 7 49 0.000000136261
Magnolia biondii Chr18 4 CH_mbi_438 4 10 0.0000779136
Magnolia biondii Chr02 4 CH_mbi_508 3 3 0.000220055
Malus domestica Chr09 4 CH_mdo_245 4 4 0.000000364163
Malus domestica Chr00 4 CH_mdo_553 3 3 0.000228638
Malus domestica Chr00 4 CH_mdo_554 3 3 0.000228638
Malus domestica Chr16 4 CH_mdo_727 3 4 0.000913442
Manihot esculenta Chromosome09 4 CH_mes_181 6 9 0.000000345742
Manihot esculenta Chromosome11 4 CH_mes_24 13 13 3.12586e-24
Manihot esculenta Chromosome01 4 CH_mes_289 4 4 0.0000846085
Manihot esculenta Chromosome16 4 CH_mes_290 4 4 0.0000846085
Manihot esculenta Chromosome09 4 CH_mes_32 20 77 1.92519e-21
Manihot esculenta Chromosome07 4 CH_mes_6 30 30 2.26626e-61
Manihot esculenta Chromosome05 4 CH_mes_86 8 9 0.00000000000182517
Marchantia polymorpha scaffold_160 4 CH_mpo_22 4 4 0.000000000509296
Medicago truncatula chr8 4 CH_mtr_123 6 7 0.0000000000059778
Medicago truncatula chr1 4 CH_mtr_400 4 6 0.00000517963
Nelumbo nucifera chr1 4 CH_nnu_10 12 15 1.06601e-26
Nelumbo nucifera chr1 4 CH_nnu_146 5 18 0.00000627258
Olea europaea chr6 4 CH_oeu_5 9 9 5.945e-22
Petunia axillaris Peaxi162Scf00073 4 CH_pax_225 3 3 0.000112714
Petunia axillaris Peaxi162Scf00046 4 CH_pax_88 5 13 0.00000032106
Punica granatum NC_045128.1 4 CH_pgr_125 5 8 0.0000000419182
Punica granatum NC_045128.1 4 CH_pgr_389 3 4 0.000836728
Prunus persica Pp03 4 CH_ppe_17 11 11 7.60819e-24
Prunus persica Pp03 4 CH_ppe_205 5 7 0.000000201405
Prunus persica Pp04 4 CH_ppe_292 4 6 0.0000453788
Prunus persica Pp02 4 CH_ppe_341 6 39 0.0000901869
Prunus persica Pp07 4 CH_ppe_482 3 3 0.000947943
Prunus persica Pp01 4 CH_ppe_483 3 3 0.000947943
Pisum sativum chr1LG6 4 CH_psa_153 5 21 0.00000423928
Papaver somniferum NC_039358.1 4 CH_pso_100 8 30 0.00000000000217586
Papaver somniferum NW_020620714.1 4 CH_pso_60 9 31 0.00000000000000861147
Populus trichocarpa Chr07 4 CH_ptr_231 4 4 0.000000963897
Populus trichocarpa Chr03 4 CH_ptr_342 4 9 0.000120356
Populus trichocarpa Chr17 4 CH_ptr_41 11 29 6.58658e-18
Phaseolus vulgaris Chr10 4 CH_pvu_17 12 25 2.91478e-21
Phaseolus vulgaris Chr07 4 CH_pvu_37 8 9 2.41916e-16
Quercus lobata 10 4 CH_qlo_119 10 23 1.18051e-16
Quercus lobata 8 4 CH_qlo_265 6 8 0.000000000143383
Quercus lobata 4 4 CH_qlo_410 5 7 0.000000049007
Quercus lobata 4 4 CH_qlo_520 4 4 0.00000105501
Quercus lobata 4 4 CH_qlo_542 6 28 0.0000018578
Quercus lobata 9 4 CH_qlo_591 4 5 0.00000526554
Quercus lobata 8 4 CH_qlo_946 3 3 0.000469734
Rosa chinensis RcHm_v2.0_Chr4 4 CH_rch_179 6 12 0.000000000727352
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_264 5 9 0.0000000647938
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_295 5 11 0.00000023696
Rosa chinensis RcHm_v2.0_Chr2 4 CH_rch_774 3 4 0.00084346
Rhododendron simsii chr02 4 CH_rsi_192 4 4 0.0000000736819
Rhododendron simsii chr08 4 CH_rsi_319 4 11 0.0000241519
Salvia bowleyana GWHASIU00000005 4 CH_sbo_144 5 8 0.00000000685534
Salvia bowleyana GWHASIU00000002 4 CH_sbo_208 4 5 0.000000518424
Salvia bowleyana GWHASIU00000007 4 CH_sbo_392 4 16 0.000186705
Salix brachista GWHAAZH00000017 4 CH_sbr_103 5 7 0.0000000135251
Salix brachista GWHAAZH00000003 4 CH_sbr_144 4 4 0.000000366073
Salix brachista GWHAAZH00000019 4 CH_sbr_45 6 6 0.00000000000111951
Simmondsia chinensis GWHAASQ00000023 4 CH_sci_111 4 7 0.0000105304
Simmondsia chinensis GWHAASQ00000001 4 CH_sci_185 3 3 0.000165073
Sechium edule LG10 4 CH_sed_124 6 27 0.00000278703
Sechium edule LG05 4 CH_sed_257 3 3 0.000558484
Sechium edule LG06 4 CH_sed_32 12 80 0.000000000000116689
Sequoiadendron giganteum chr2 4 CH_sgi_1155 3 3 0.000155494
Sequoiadendron giganteum chr1 4 CH_sgi_1318 3 4 0.000621255
Sequoiadendron giganteum chr7 4 CH_sgi_32 15 22 1.18955e-33
Sequoiadendron giganteum chr4 4 CH_sgi_379 6 10 0.000000000106566
Solanum lycopersicum SL4.0ch02 4 CH_sly_449 3 3 0.000176837
Solanum lycopersicum SL4.0ch12 4 CH_sly_94 6 10 0.000000000163912
Schrenkiella parvula ch7-5 4 CH_spa_175 3 3 0.000351685
Schrenkiella parvula ch3-1 4 CH_spa_176 3 3 0.000351685
Schrenkiella parvula ch4-6 4 CH_spa_26 5 5 0.00000000186545
Solanum pennellii Spenn-ch12 4 CH_spe_210 5 27 0.00000492802
Solanum tuberosum ST4.03ch12 4 CH_stu_108 6 8 0.00000000000721448
Solanum tuberosum ST4.03ch02 4 CH_stu_203 4 4 0.000000148294
Trochodendron aralioides group10 4 CH_tar_229 4 9 0.0000158313
Theobroma cacao Chromosome_5 4 CH_tca_293 3 3 0.000106563
Theobroma cacao Chromosome_1 4 CH_tca_353 3 4 0.000425756
Tarenaya hassleriana NW_010971389.1 4 CH_tha_149 3 3 0.000366757
Tarenaya hassleriana NW_010965304.1 4 CH_tha_150 3 3 0.000366757
Tarenaya hassleriana NW_010966177.1 4 CH_tha_57 4 4 0.000000832608
Tarenaya hassleriana NW_010960188.1 4 CH_tha_58 4 4 0.000000832608
Trifolium pratense Tp57577_TGAC_v2_scaf_587 4 CH_tpr_114 4 4 0.00000126449
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_21 7 8 0.00000000000015738
Trifolium pratense Tp57577_TGAC_v2_LG5 4 CH_tpr_342 3 3 0.000491274
Tripterygium wilfordii NC_052244.1 4 CH_twi_104 5 9 0.0000000878992
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_111 5 11 0.000000147577
Vaccinium macrocarpon chr8_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_261 3 3 0.000118376
Vigna mungo CM024078.1 4 CH_vmu_5 10 17 2.88109e-19
Vanilla planifolia CM028150.1 4 CH_vpl_40 5 5 0.000000000426361
Vanilla planifolia CM028153.1 4 CH_vpl_59 6 17 0.00000000844755
Vitis vinifera chr9 4 CH_vvi_201 4 5 0.00000418679
Vitis vinifera chr12 4 CH_vvi_57 8 13 0.0000000000000261986
Zea mays 6 4 CH_zma_2 18 23 1.25322e-42
Zea mays 5 4 CH_zma_86 5 9 0.0000000574288

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001