Functional clusters
Information
- Type Gene Ontology
- Description rRNA N-glycosylase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 3 | CH_amhyb_37 | 4 | 4 | 0.00000001071 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 3 | CH_bvu_16 | 9 | 23 | 3.62064e-17 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 3 | CH_bvu_6 | 10 | 14 | 3.8891e-23 |
| Cannabis sativa | NC_044377.1 | 3 | CH_cansat_22 | 6 | 7 | 1.61545e-17 |
| Citrullus lanatus | CG_Chr08 | 3 | CH_cla_13 | 5 | 9 | 0.0000000000012288 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 3 | CH_cqu_27 | 7 | 7 | 3.00046e-18 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4365 | 3 | CH_cqu_454 | 3 | 6 | 0.000333534 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3626 | 3 | CH_cqu_504 | 3 | 7 | 0.00058337 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3799 | 3 | CH_cqu_83 | 5 | 7 | 0.000000000159707 |
| Daucus carota | DCARv2_Chr9 | 3 | CH_dca_18 | 7 | 15 | 2.19117e-16 |
| Durio zibethinus | NW_019168470.1 | 3 | CH_dzi_11 | 6 | 7 | 3.36951e-20 |
| Gossypium hirsutum | A13 | 3 | CH_ghi_187 | 3 | 3 | 0.0000000106947 |
| Gossypium hirsutum | D13 | 3 | CH_ghi_663 | 2 | 3 | 0.000801015 |
| Gossypium raimondii | Chr13 | 3 | CH_gra_368 | 2 | 4 | 0.000964906 |
| Hydrangea macrophylla | Hma1.2p1_0383F.1 | 3 | CH_hma_78 | 3 | 3 | 0.000000647896 |
| Malus domestica | Chr06 | 3 | CH_mdo_541 | 2 | 2 | 0.000227527 |
| Manihot esculenta | Chromosome04 | 3 | CH_mes_77 | 4 | 4 | 0.000000000000683121 |
| Oryza sativa ssp. japonica | chr03 | 3 | CH_osa_33 | 8 | 47 | 0.0000000000000389584 |
| Prunus persica | Pp01 | 3 | CH_ppe_97 | 4 | 5 | 0.00000000000622694 |
| Striga asiatica | scaffold86 | 3 | CH_sas_19 | 5 | 18 | 0.000000196079 |
| Striga asiatica | scaffold67 | 3 | CH_sas_26 | 4 | 7 | 0.000000921531 |
| Sechium edule | LG09 | 3 | CH_sed_12 | 7 | 7 | 8.22769e-21 |
| Theobroma cacao | Chromosome_7 | 3 | CH_tca_108 | 4 | 7 | 0.00000000288639 |
| Amaranthus hybridus | AmaHy_arrow1_Scaffold_13 | 4 | CH_amhyb_37 | 4 | 4 | 0.00000001071 |
| Beta vulgaris | Chr5_EL10_PGA_scaffold2 | 4 | CH_bvu_16 | 9 | 23 | 3.62064e-17 |
| Beta vulgaris | Chr9_EL10_PGA_scaffold8 | 4 | CH_bvu_6 | 10 | 14 | 3.8891e-23 |
| Cannabis sativa | NC_044377.1 | 4 | CH_cansat_22 | 6 | 7 | 1.61545e-17 |
| Citrullus lanatus | CG_Chr08 | 4 | CH_cla_13 | 5 | 9 | 0.0000000000012288 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3035 | 4 | CH_cqu_27 | 7 | 7 | 3.00046e-18 |
| Chenopodium quinoa | C_Quinoa_Scaffold_4365 | 4 | CH_cqu_454 | 3 | 6 | 0.000333534 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3626 | 4 | CH_cqu_504 | 3 | 7 | 0.00058337 |
| Chenopodium quinoa | C_Quinoa_Scaffold_3799 | 4 | CH_cqu_83 | 5 | 7 | 0.000000000159707 |
| Daucus carota | DCARv2_Chr9 | 4 | CH_dca_18 | 7 | 15 | 2.19117e-16 |
| Durio zibethinus | NW_019168470.1 | 4 | CH_dzi_11 | 6 | 7 | 3.36951e-20 |
| Gossypium hirsutum | A13 | 4 | CH_ghi_187 | 3 | 3 | 0.0000000106947 |
| Gossypium hirsutum | D13 | 4 | CH_ghi_663 | 2 | 3 | 0.000801015 |
| Gossypium raimondii | Chr13 | 4 | CH_gra_368 | 2 | 4 | 0.000964906 |
| Hydrangea macrophylla | Hma1.2p1_0383F.1 | 4 | CH_hma_78 | 3 | 3 | 0.000000647896 |
| Malus domestica | Chr06 | 4 | CH_mdo_541 | 2 | 2 | 0.000227527 |
| Manihot esculenta | Chromosome04 | 4 | CH_mes_77 | 4 | 4 | 0.000000000000683121 |
| Oryza sativa ssp. japonica | chr03 | 4 | CH_osa_33 | 8 | 47 | 0.0000000000000389584 |
| Prunus persica | Pp01 | 4 | CH_ppe_97 | 4 | 5 | 0.00000000000622694 |
| Striga asiatica | scaffold86 | 4 | CH_sas_19 | 5 | 18 | 0.000000196079 |
| Striga asiatica | scaffold67 | 4 | CH_sas_26 | 4 | 7 | 0.000000921531 |
| Sechium edule | LG09 | 4 | CH_sed_12 | 7 | 7 | 8.22769e-21 |
| Theobroma cacao | Chromosome_7 | 4 | CH_tca_108 | 4 | 7 | 0.00000000288639 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |