Functional clusters

Information

  • Type Gene Ontology
  • Description alpha,alpha-trehalase activity

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_4119_HRSCAF_4138 3 CH_ama_57 2 2 0.0000862218
Aquilegia oxysepala CHR05 3 CH_aox_217 2 3 0.000240587
Camellia sinensis var. sinensis Chr14 3 CH_camsi_85 5 23 0.00000000000111545
Cannabis sativa NC_044374.1 3 CH_cansat_212 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold567 3 CH_can_295 2 2 0.0000826105
Corylus avellana 4 3 CH_cav_219 3 30 0.0000357626
Carya illinoinensis Chr11 3 CH_cil_403 2 2 0.000185948
Davidia involucrata GWHABJS00000019 3 CH_din_327 2 2 0.000300075
Lupinus albus Lalb_Chr05 3 CH_lal_237 2 2 0.0000524824
Lonicera japonica GWHAAZE00000008 3 CH_lonja_433 2 3 0.000179657
Olea europaea scaffold138 3 CH_oeu_47 3 4 0.0000000170958
Punica granatum NC_045127.1 3 CH_pgr_169 3 5 0.000000844425
Punica granatum NC_045130.1 3 CH_pgr_375 2 2 0.000750356
Quercus lobata CM012294 3 CH_qlo_216 4 4 0.00000000000619333
Salix brachista GWHAAZH00000003 3 CH_sbr_281 2 2 0.000189042
Sequoiadendron giganteum chr3 3 CH_sgi_1276 2 2 0.000487151
Sequoiadendron giganteum chr8 3 CH_sgi_546 3 3 0.0000000355983
Sapria himalayana scaffold4_21100006 3 CH_shi_190 2 3 0.000171536
Selaginella moellendorffii scaffold_38 3 CH_smo_173 2 2 0.000560224
Theobroma cacao Chromosome_3 3 CH_tca_73 4 8 0.0000000000824943
Tripterygium wilfordii NC_052246.1 3 CH_twi_207 2 2 0.000055788
Utricularia gibba unitig_1 3 CH_ugi_95 2 2 0.000246144
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 3 CH_vma_343 2 2 0.000557543
Avicennia marina ScioBoG_4119_HRSCAF_4138 4 CH_ama_57 2 2 0.0000862218
Aquilegia oxysepala CHR05 4 CH_aox_217 2 3 0.000240587
Camellia sinensis var. sinensis Chr14 4 CH_camsi_85 5 23 0.00000000000111545
Cannabis sativa NC_044374.1 4 CH_cansat_212 2 2 0.0000656642
Capsicum annuum PGAv.1.6.scaffold567 4 CH_can_295 2 2 0.0000826105
Corylus avellana 4 4 CH_cav_219 3 30 0.0000357626
Carya illinoinensis Chr11 4 CH_cil_403 2 2 0.000185948
Davidia involucrata GWHABJS00000019 4 CH_din_327 2 2 0.000300075
Lupinus albus Lalb_Chr05 4 CH_lal_237 2 2 0.0000524824
Lonicera japonica GWHAAZE00000008 4 CH_lonja_433 2 3 0.000179657
Olea europaea scaffold138 4 CH_oeu_47 3 4 0.0000000170958
Punica granatum NC_045127.1 4 CH_pgr_169 3 5 0.000000844425
Punica granatum NC_045130.1 4 CH_pgr_375 2 2 0.000750356
Quercus lobata CM012294 4 CH_qlo_216 4 4 0.00000000000619333
Salix brachista GWHAAZH00000003 4 CH_sbr_281 2 2 0.000189042
Sequoiadendron giganteum chr3 4 CH_sgi_1276 2 2 0.000487151
Sequoiadendron giganteum chr8 4 CH_sgi_546 3 3 0.0000000355983
Sapria himalayana scaffold4_21100006 4 CH_shi_190 2 3 0.000171536
Selaginella moellendorffii scaffold_38 4 CH_smo_173 2 2 0.000560224
Theobroma cacao Chromosome_3 4 CH_tca_73 4 8 0.0000000000824943
Tripterygium wilfordii NC_052246.1 4 CH_twi_207 2 2 0.000055788
Utricularia gibba unitig_1 4 CH_ugi_95 2 2 0.000246144
Vaccinium macrocarpon chr6_Vaccinium_macrocarpon_Stevens_v1 4 CH_vma_343 2 2 0.000557543

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001