Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Vanilla planifolia CM028161.1 1 CH_vpl_136 8 23 0.0000594682
Vanilla planifolia CM028161.1 2 CH_vpl_136 8 23 0.0000594682

Available child term results

Ontology identifier Description Number of clusters
27.1.1 Multi-process regulation.circadian clock system.core oscillator protein (LHY/CCA1) 19
27.1.2 Multi-process regulation.circadian clock system.transcriptional CCA1 coregulator (CSU4) 4
27.1.3 Multi-process regulation.circadian clock system.evening oscillator protein (TOC1) 4
27.1.4 Multi-process regulation.circadian clock system.time-of-day-dependent expressed repressor (PRR) 2
27.1.5.2 Multi-process regulation.circadian clock system.morning element regulation.activation factor (TCP20) 2
27.1.5.3 Multi-process regulation.circadian clock system.morning element regulation.repression factor (CHE) 6
27.1.5.4 Multi-process regulation.circadian clock system.morning element regulation.repression factor (TZP) 10
27.1.6.1 Multi-process regulation.circadian clock system.evening element regulation.transcriptional co-activator (LNK) 12
27.1.6.2 Multi-process regulation.circadian clock system.evening element regulation.clock factor (REVEILLE) 2
27.1.6.3.1 Multi-process regulation.circadian clock system.evening element regulation.Evening Complex (EC).component LUX 4
27.1.6.3.2 Multi-process regulation.circadian clock system.evening element regulation.Evening Complex (EC).component ELF3 14
27.1.6.3.3 Multi-process regulation.circadian clock system.evening element regulation.Evening Complex (EC).component ELF4 24
27.1.7 Multi-process regulation.circadian clock system.circadian clock regulator (TIC) 8
27.1.8 Multi-process regulation.circadian clock system.circadian clock regulator (FIO1) 10
27.1.9 Multi-process regulation.circadian clock system.light-dependent circadian clock regulator (XCT) 8
27.10.1.1 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TORC complex.phosphatidylinositol kinase component TOR 21
27.10.1.2 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TORC complex.regulatory component RAPTOR 8
27.10.1.3 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TORC complex.regulatory component LST8 6
27.10.2.2 Multi-process regulation.TOR (Target Of Rapamycin) signalling.TOR kinase substrates.S6K-dependent protein translation regulator (MRF) 30
27.10.3 Multi-process regulation.TOR (Target Of Rapamycin) signalling.protein kinase (YAK1) 2
27.11.1.1 Multi-process regulation.UPR (Unfolded Protein Response) signalling.IRE1-bZIP60 pathway.bifunctional protein kinase and ribonuclease (IRE1) 16
27.11.1.3 Multi-process regulation.UPR (Unfolded Protein Response) signalling.IRE1-bZIP60 pathway.regulatory mediator (SVB) 40
27.11.2.4 Multi-process regulation.UPR (Unfolded Protein Response) signalling.S1P/S2P-bZIP17/28 pathway.regulatory co-chaperone (BAG7) 4
27.12.2 Multi-process regulation.RAM (Regulation of Ace2 and Morphogenesis) signalling.NDR-activator component (MOB1/2) 4
27.12.3 Multi-process regulation.RAM (Regulation of Ace2 and Morphogenesis) signalling.protein kinase component (SIK1) 2
27.12.4 Multi-process regulation.RAM (Regulation of Ace2 and Morphogenesis) signalling.scaffold component (MO25) 12
27.12.5 Multi-process regulation.RAM (Regulation of Ace2 and Morphogenesis) signalling.scaffold component (FRY) 4
27.13.1 Multi-process regulation.ppGpp (hyperphosphorylated guanylate) signalling.ppGpp synthetase (CRSH) 2
27.13.3 Multi-process regulation.ppGpp (hyperphosphorylated guanylate) signalling.ppGpp hydrolase (RSH1) 6
27.2.10 Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory factor (ILP) 10
27.2.3 Multi-process regulation.Programmed Cell Death (PCD) system.PCD suppressor (BI-1) 20
27.2.4 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death 2
27.2.4.1 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.cysteine proteinase (VPE) 2
27.2.4.2 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP1) 100
27.2.4.3 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.metacaspase-like regulator (MCP2) 57
27.2.4.4 Multi-process regulation.Programmed Cell Death (PCD) system.vacuole-mediated cell death.cysteine protease (XCP) 14
27.2.5 Multi-process regulation.Programmed Cell Death (PCD) system.PCD suppressor (BON) 52
27.2.6 Multi-process regulation.Programmed Cell Death (PCD) system.BON-interacting PCD co-suppressor (BAP) 88
27.2.8 Multi-process regulation.Programmed Cell Death (PCD) system.PCD regulatory factor (PDCD5) 4
27.2.9.2 Multi-process regulation.Programmed Cell Death (PCD) system.CPR5-CKI signalling pathway.cyclin-dependent kinase inhibitor (SIM) 16
27.3.3 Multi-process regulation.SnRK1-kinase regulatory system.SnRK1-interacting factor (FLZ) 20
27.4.2 Multi-process regulation.Rop-GTPase regulatory system.ROP-activating protein (RopGAP) 6
27.4.3.1 Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (PRONE) 2
27.4.3.2 Multi-process regulation.Rop-GTPase regulatory system.RopGEF guanine nucleotide exchange factor activities.exchange factor (DHR2) 1
27.4.4 Multi-process regulation.Rop-GTPase regulatory system.guanine nucleotide dissociation inhibitor (RopGDI) 8
27.4.5.1 Multi-process regulation.Rop-GTPase regulatory system.ROP GTPase effector activities.GTPase effector (RIP) 2
27.4.5.2 Multi-process regulation.Rop-GTPase regulatory system.ROP GTPase effector activities.GTPase effector (RIC) 2
27.4.5.3 Multi-process regulation.Rop-GTPase regulatory system.ROP GTPase effector activities.GTPase effector (BDR) 12
27.4.7 Multi-process regulation.Rop-GTPase regulatory system.GTPase interactive protein kinase (RBK/RRK) 2
27.5.1.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.lyso-phosphatidylinositol acyltransferase (LPIAT) 2
27.5.1.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.myo-inositol-1-phosphate synthase (MIPS) 2
27.5.1.4.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 3-kinase (VPS34) 9
27.5.1.4.2.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 4-kinase activities.phosphatidylinositol 4-kinase (PI4K-alpha) 8
27.5.1.4.2.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 4-kinase activities.phosphatidylinositol 4-kinase (PI4K-gamma) 2
27.5.1.4.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 4-phosphate 5-kinase (PIP5K) 6
27.5.1.4.4 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 3-phosphate 5-kinase (FAB1) 6
27.5.1.4.5 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.phosphatidylinositol kinase activities.phosphatidylinositol 3,5-bisphosphate biosynthesis scaffold protein (VAC14) 12
27.5.1.5.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.inositol phosphate kinase activities.inositol pentakisphosphate kinase (IPK1) 8
27.5.1.5.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.inositol phosphate kinase activities.inositol polyphosphate multikinase (IPK2) 11
27.5.1.5.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.inositol phosphate kinase activities.inositol polyphosphate kinase (ITPK) 12
27.5.1.5.5 Multi-process regulation.phosphatidylinositol and inositol phosphate system.biosynthesis.inositol phosphate kinase activities.bifunctional inositol pyrophosphate kinase and phosphatase (VIP) 22
27.5.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation 2
27.5.2.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.inositol-phosphate monophosphatase (IMPL) 6
27.5.2.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.inositol-polyphosphate 1-phosphatase (SAL) 14
27.5.2.4.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.5-phosphatase activities.type-I inositol-polyphosphate 5-phosphatase 12
27.5.2.4.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.5-phosphatase activities.type-II inositol-polyphosphate 5-phosphatase 14
27.5.2.4.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.5-phosphatase activities.type-IV inositol-polyphosphate 5-phosphatase 6
27.5.2.5 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.phosphoinositide 3-phosphatase (PTEN) 18
27.5.2.6 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.phosphatidylinositol 3-phosphate phosphatase (MTM) 11
27.5.2.7.1 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.SAC phosphoinositide phosphatase activities.SAC-group-I phosphoinositide 3,5-phosphatase 40
27.5.2.7.2 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.SAC phosphoinositide phosphatase activities.SAC-group-II phosphoinositide 3-/4-phosphatase 24
27.5.2.7.3 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.SAC phosphoinositide phosphatase activities.SAC-group-III phosphoinositide phosphatase 10
27.5.2.8 Multi-process regulation.phosphatidylinositol and inositol phosphate system.degradation.phosphatidylinositol phospholipase C (PI-PLC) 175
27.6.1 Multi-process regulation.pyrophosphate homeostasis.cytosolic pyrophosphatase 10
27.6.2 Multi-process regulation.pyrophosphate homeostasis.plastidial pyrophosphatase 5
27.6.3 Multi-process regulation.pyrophosphate homeostasis.proton-translocating pyrophosphatase (VHP1) 4
27.7 Multi-process regulation.calcium-dependent signalling 4
27.7.1 Multi-process regulation.calcium-dependent signalling.calcium sensor (CaM) 14
27.7.2 Multi-process regulation.calcium-dependent signalling.calcium sensor (CML) 65
27.7.3 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities 2
27.7.3.1 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SCS-clade calcium sensor 16
27.7.3.2 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SCSsister-clade calcium sensor 2
27.7.3.3 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SRC1-clade calcium sensor 58
27.7.3.4 Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SRC2-clade calcium sensor 20
27.7.6.1 Multi-process regulation.calcium-dependent signalling.CBL-CIPK calcium sensor and kinase complex.calcium sensor (CBL) 20
27.7.6.2 Multi-process regulation.calcium-dependent signalling.CBL-CIPK calcium sensor and kinase complex.CBL-dependent protein kinase (CIPK) 7
27.8.1 Multi-process regulation.PEB protein-dependent signalling.regulatory protein (PEBP) 33
27.9 Multi-process regulation.G-protein-dependent signalling 10
27.9.1 Multi-process regulation.G-protein-dependent signalling.G-protein coupled receptor (GPCR) 2
27.9.2.2 Multi-process regulation.G-protein-dependent signalling.heterotrimeric G-protein complex.non-canonical component alpha (XLG) 9
27.9.2.3 Multi-process regulation.G-protein-dependent signalling.heterotrimeric G-protein complex.component beta 8
27.9.2.4 Multi-process regulation.G-protein-dependent signalling.heterotrimeric G-protein complex.component gamma 2
27.9.3 Multi-process regulation.G-protein-dependent signalling.G-protein signalling regulator (RGS1) 4

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001