Functional clusters
Information
- Type MapMan
- Description Multi-process regulation.Programmed Cell Death (PCD) system.CPR5-CKI signalling pathway.cyclin-dependent kinase inhibitor (SIM)
Cluster overview
Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
---|---|---|---|---|---|---|
Citrus clementina | scaffold_4 | 1 | CH_ccl_408 | 2 | 2 | 0.000246093 |
Daucus carota | DCARv2_Chr4 | 1 | CH_dca_101 | 3 | 5 | 0.0000000610117 |
Lactuca sativa | Lsat_1_v8_lg_2 | 1 | CH_lsa_460 | 2 | 2 | 0.000308404 |
Manihot esculenta | Chromosome10 | 1 | CH_mes_469 | 2 | 2 | 0.000610631 |
Punica granatum | NC_045134.1 | 1 | CH_pgr_332 | 2 | 2 | 0.000450214 |
Populus trichocarpa | Chr10 | 1 | CH_ptr_512 | 2 | 2 | 0.000578001 |
Rhododendron simsii | chr09 | 1 | CH_rsi_451 | 2 | 2 | 0.000193592 |
Salix brachista | GWHAAZH00000008 | 1 | CH_sbr_302 | 2 | 2 | 0.000189042 |
Citrus clementina | scaffold_4 | 2 | CH_ccl_408 | 2 | 2 | 0.000246093 |
Daucus carota | DCARv2_Chr4 | 2 | CH_dca_101 | 3 | 5 | 0.0000000610117 |
Lactuca sativa | Lsat_1_v8_lg_2 | 2 | CH_lsa_460 | 2 | 2 | 0.000308404 |
Manihot esculenta | Chromosome10 | 2 | CH_mes_469 | 2 | 2 | 0.000610631 |
Punica granatum | NC_045134.1 | 2 | CH_pgr_332 | 2 | 2 | 0.000450214 |
Populus trichocarpa | Chr10 | 2 | CH_ptr_512 | 2 | 2 | 0.000578001 |
Rhododendron simsii | chr09 | 2 | CH_rsi_451 | 2 | 2 | 0.000193592 |
Salix brachista | GWHAAZH00000008 | 2 | CH_sbr_302 | 2 | 2 | 0.000189042 |
Functional Clusters Experiments
Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
---|---|---|---|---|---|---|---|
1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |