Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.Programmed Cell Death (PCD) system.CPR5-CKI signalling pathway.cyclin-dependent kinase inhibitor (SIM)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Citrus clementina scaffold_4 1 CH_ccl_408 2 2 0.000246093
Daucus carota DCARv2_Chr4 1 CH_dca_101 3 5 0.0000000610117
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_460 2 2 0.000308404
Manihot esculenta Chromosome10 1 CH_mes_469 2 2 0.000610631
Punica granatum NC_045134.1 1 CH_pgr_332 2 2 0.000450214
Populus trichocarpa Chr10 1 CH_ptr_512 2 2 0.000578001
Rhododendron simsii chr09 1 CH_rsi_451 2 2 0.000193592
Salix brachista GWHAAZH00000008 1 CH_sbr_302 2 2 0.000189042
Citrus clementina scaffold_4 2 CH_ccl_408 2 2 0.000246093
Daucus carota DCARv2_Chr4 2 CH_dca_101 3 5 0.0000000610117
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_460 2 2 0.000308404
Manihot esculenta Chromosome10 2 CH_mes_469 2 2 0.000610631
Punica granatum NC_045134.1 2 CH_pgr_332 2 2 0.000450214
Populus trichocarpa Chr10 2 CH_ptr_512 2 2 0.000578001
Rhododendron simsii chr09 2 CH_rsi_451 2 2 0.000193592
Salix brachista GWHAAZH00000008 2 CH_sbr_302 2 2 0.000189042

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001