Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.calcium-dependent signalling.SnRK2-interacting calcium sensor activities.SRC1-clade calcium sensor

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Avicennia marina ScioBoG_94932_HRSCAF_95134 1 CH_ama_16 3 3 0.0000000111518
Aquilegia oxysepala CHR01 1 CH_aox_176 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 1 CH_arhy_198 3 3 0.0000000268895
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 1 CH_arhy_646 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00024 1 CH_atr_205 2 2 0.0000794407
Beta vulgaris Chr9_EL10_PGA_scaffold8 1 CH_bvu_235 2 2 0.000248375
Citrus clementina scaffold_2 1 CH_ccl_131 3 3 0.0000000403763
Carpinus fangiana Cfa06 1 CH_cfa_316 2 2 0.000227204
Carya illinoinensis Chr03 1 CH_cil_256 3 6 0.00000115233
Citrullus lanatus CG_Chr02 1 CH_cla_47 3 3 0.000000118051
Cucumis melo chr01 1 CH_cme_101 3 4 0.000000267009
Durio zibethinus NW_019167893.1 1 CH_dzi_88 3 4 0.000000128889
Erigeron canadensis Conyza_canadensis_scaffold:3 1 CH_eca_403 2 2 0.000269233
Eucalyptus grandis Chr11 1 CH_egr_259 4 6 0.000000000045108
Glycine max Gm18 1 CH_gma_566 2 2 0.000569336
Gossypium raimondii Chr01 1 CH_gra_368 2 2 0.000321664
Lotus japonicus chr1 1 CH_lja_116 3 3 0.0000000767031
Lonicera japonica GWHAAZE00000001 1 CH_lonja_118 4 7 0.00000000033824
Magnolia biondii Chr13 1 CH_mbi_258 3 8 0.00000693128
Manihot esculenta Chromosome13 1 CH_mes_80 4 4 0.0000000000102468
Medicago truncatula chr7 1 CH_mtr_236 3 3 0.0000000101287
Oryza sativa ssp. japonica chr09 1 CH_osa_28 5 12 0.000000000000970061
Populus trichocarpa Chr02 1 CH_ptr_17 8 9 2.75103e-25
Salix brachista GWHAAZH00000002 1 CH_sbr_345 2 2 0.000378084
Sechium edule LG04 1 CH_sed_96 3 5 0.000000305353
Trochodendron aralioides group7 1 CH_tar_449 2 2 0.00036022
Theobroma cacao Chromosome_1 1 CH_tca_354 2 2 0.000219716
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 1 CH_vma_267 2 2 0.0000929238
Vanilla planifolia CM028158.1 1 CH_vpl_20 4 5 0.0000000000907633
Avicennia marina ScioBoG_94932_HRSCAF_95134 2 CH_ama_16 3 3 0.0000000111518
Aquilegia oxysepala CHR01 2 CH_aox_176 2 2 0.0000801989
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.07 2 CH_arhy_198 3 3 0.0000000268895
Arachis hypogaea arahy.Tifrunner.gnm1.Arahy.17 2 CH_arhy_646 2 2 0.000449075
Amborella trichopoda AmTr_v1.0_scaffold00024 2 CH_atr_205 2 2 0.0000794407
Beta vulgaris Chr9_EL10_PGA_scaffold8 2 CH_bvu_235 2 2 0.000248375
Citrus clementina scaffold_2 2 CH_ccl_131 3 3 0.0000000403763
Carpinus fangiana Cfa06 2 CH_cfa_316 2 2 0.000227204
Carya illinoinensis Chr03 2 CH_cil_256 3 6 0.00000115233
Citrullus lanatus CG_Chr02 2 CH_cla_47 3 3 0.000000118051
Cucumis melo chr01 2 CH_cme_101 3 4 0.000000267009
Durio zibethinus NW_019167893.1 2 CH_dzi_88 3 4 0.000000128889
Erigeron canadensis Conyza_canadensis_scaffold:3 2 CH_eca_403 2 2 0.000269233
Eucalyptus grandis Chr11 2 CH_egr_259 4 6 0.000000000045108
Gossypium hirsutum D07 2 CH_ghi_791 2 2 0.000560733
Glycine max Gm18 2 CH_gma_566 2 2 0.000569336
Gossypium raimondii Chr01 2 CH_gra_368 2 2 0.000321664
Lotus japonicus chr1 2 CH_lja_116 3 3 0.0000000767031
Lonicera japonica GWHAAZE00000001 2 CH_lonja_118 4 7 0.00000000033824
Magnolia biondii Chr13 2 CH_mbi_258 3 8 0.00000693128
Manihot esculenta Chromosome13 2 CH_mes_80 4 4 0.0000000000102468
Oryza sativa ssp. japonica chr09 2 CH_osa_28 5 12 0.000000000000970061
Populus trichocarpa Chr02 2 CH_ptr_17 8 9 2.75103e-25
Salix brachista GWHAAZH00000002 2 CH_sbr_345 2 2 0.000378084
Sechium edule LG04 2 CH_sed_96 3 5 0.000000305353
Trochodendron aralioides group7 2 CH_tar_449 2 2 0.00036022
Theobroma cacao Chromosome_1 2 CH_tca_354 2 2 0.000219716
Vaccinium macrocarpon chr7_Vaccinium_macrocarpon_Stevens_v1 2 CH_vma_267 2 2 0.0000929238
Vanilla planifolia CM028158.1 2 CH_vpl_20 4 5 0.0000000000907633

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001