Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.UPR (Unfolded Protein Response) signalling.IRE1-bZIP60 pathway.bifunctional protein kinase and ribonuclease (IRE1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Capsicum annuum PGAv.1.6.scaffold1238 1 CH_can_355 2 2 0.000247831
Corchorus olitorius AWUE01019716.1 1 CH_col_122 2 2 0.000876296
Erigeron canadensis Conyza_canadensis_scaffold:6 1 CH_eca_118 3 3 0.0000000302034
Eucalyptus grandis Chr03 1 CH_egr_251 7 60 0.0000000000234413
Eucalyptus grandis Chr10 1 CH_egr_266 5 9 0.0000000000685389
Helianthus annuus HanXRQChr15 1 CH_han_591 2 2 0.000231857
Lactuca sativa Lsat_1_v8_lg_2 1 CH_lsa_164 3 3 0.0000000396314
Rhododendron simsii chr10 1 CH_rsi_34 7 18 1.44749e-18
Capsicum annuum PGAv.1.6.scaffold1238 2 CH_can_355 2 2 0.000247831
Corchorus olitorius AWUE01019716.1 2 CH_col_122 2 2 0.000876296
Erigeron canadensis Conyza_canadensis_scaffold:6 2 CH_eca_118 3 3 0.0000000302034
Eucalyptus grandis Chr03 2 CH_egr_251 7 60 0.0000000000234413
Eucalyptus grandis Chr10 2 CH_egr_266 5 9 0.0000000000685389
Helianthus annuus HanXRQChr15 2 CH_han_591 2 2 0.000231857
Lactuca sativa Lsat_1_v8_lg_2 2 CH_lsa_164 3 3 0.0000000396314
Rhododendron simsii chr10 2 CH_rsi_34 7 18 1.44749e-18

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001