Functional clusters
Information
- Type MapMan
- Description Multi-process regulation.calcium-dependent signalling.calcium sensor (CML)
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Arabidopsis thaliana | Chr2 | 1 | CH_ath_416 | 3 | 6 | 0.000796861 |
| Arabidopsis thaliana | Chr3 | 1 | CH_ath_417 | 3 | 5 | 0.000796861 |
| Brassica carinata | ChrB05 | 1 | CH_bca_1116 | 3 | 3 | 0.000886746 |
| Coffea canephora | chr10 | 1 | CH_ccan_170 | 4 | 59 | 0.0000148803 |
| Citrus clementina | scaffold_5 | 1 | CH_ccl_362 | 3 | 3 | 0.000236464 |
| Carya illinoinensis | Chr05 | 1 | CH_cil_507 | 3 | 3 | 0.000529509 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1828 | 1 | CH_cqu_395 | 3 | 3 | 0.000200848 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 1 | CH_eca_192 | 4 | 5 | 0.00000139264 |
| Erythranthe guttata | scaffold_14 | 1 | CH_egut_107 | 5 | 5 | 0.00000000160784 |
| Erythranthe guttata | scaffold_11 | 1 | CH_egut_403 | 3 | 3 | 0.000331364 |
| Magnolia biondii | Chr16 | 1 | CH_mbi_375 | 3 | 3 | 0.0000828831 |
| Magnolia biondii | Chr01 | 1 | CH_mbi_542 | 3 | 4 | 0.000331223 |
| Marchantia polymorpha | scaffold_42 | 1 | CH_mpo_30 | 4 | 5 | 0.00000012086 |
| Medicago truncatula | chr3 | 1 | CH_mtr_406 | 4 | 6 | 0.00000444125 |
| Medicago truncatula | chr4 | 1 | CH_mtr_648 | 3 | 3 | 0.000192638 |
| Nicotiana tabacum | Nitab4.5_0000205 | 1 | CH_nta_75 | 4 | 9 | 0.0000259676 |
| Olea europaea | chr1 | 1 | CH_oeu_283 | 3 | 3 | 0.00026583 |
| Oryza sativa ssp. japonica | chr01 | 1 | CH_osa_283 | 3 | 3 | 0.000166143 |
| Physcomitrium patens | Chr13 | 1 | CH_ppa_272 | 3 | 5 | 0.00055543 |
| Papaver somniferum | NC_039362.1 | 1 | CH_pso_449 | 3 | 3 | 0.0000955609 |
| Papaver somniferum | NC_039365.1 | 1 | CH_pso_450 | 3 | 3 | 0.0000955609 |
| Papaver somniferum | NC_039361.1 | 1 | CH_pso_600 | 3 | 4 | 0.000381952 |
| Rhododendron simsii | chr10 | 1 | CH_rsi_220 | 4 | 4 | 0.000000581071 |
| Salvia bowleyana | GWHASIU00000001 | 1 | CH_sbo_312 | 3 | 3 | 0.000106259 |
| Salvia bowleyana | GWHASIU00000005 | 1 | CH_sbo_313 | 3 | 3 | 0.000106259 |
| Sequoiadendron giganteum | chr8 | 1 | CH_sgi_1004 | 3 | 4 | 0.000130045 |
| Sequoiadendron giganteum | chr1 | 1 | CH_sgi_343 | 6 | 20 | 0.000000000773071 |
| Sequoiadendron giganteum | chr2 | 1 | CH_sgi_702 | 3 | 3 | 0.0000325333 |
| Solanum lycopersicum | SL4.0ch11 | 1 | CH_sly_450 | 3 | 3 | 0.000321407 |
| Solanum pennellii | Spenn-ch11 | 1 | CH_spe_399 | 3 | 3 | 0.000225766 |
| Solanum tuberosum | ST4.03ch11 | 1 | CH_stu_214 | 4 | 4 | 0.000000464569 |
| Trochodendron aralioides | group7 | 1 | CH_tar_458 | 3 | 3 | 0.000411324 |
| Vitis vinifera | chr1 | 1 | CH_vvi_35 | 8 | 9 | 3.21055e-18 |
| Arabidopsis thaliana | Chr2 | 2 | CH_ath_416 | 3 | 6 | 0.000796861 |
| Arabidopsis thaliana | Chr3 | 2 | CH_ath_417 | 3 | 5 | 0.000796861 |
| Brassica carinata | ChrB05 | 2 | CH_bca_1116 | 3 | 3 | 0.000886746 |
| Coffea canephora | chr10 | 2 | CH_ccan_170 | 4 | 59 | 0.0000148803 |
| Citrus clementina | scaffold_5 | 2 | CH_ccl_362 | 3 | 3 | 0.000236464 |
| Carya illinoinensis | Chr05 | 2 | CH_cil_507 | 3 | 3 | 0.000529509 |
| Chenopodium quinoa | C_Quinoa_Scaffold_1828 | 2 | CH_cqu_395 | 3 | 3 | 0.000200848 |
| Erigeron canadensis | Conyza_canadensis_scaffold:1 | 2 | CH_eca_192 | 4 | 5 | 0.00000139264 |
| Eucalyptus grandis | Chr02 | 2 | CH_egr_305 | 5 | 6 | 0.00000000080924 |
| Erythranthe guttata | scaffold_14 | 2 | CH_egut_107 | 5 | 5 | 0.00000000160784 |
| Erythranthe guttata | scaffold_11 | 2 | CH_egut_403 | 3 | 3 | 0.000331364 |
| Magnolia biondii | Chr16 | 2 | CH_mbi_375 | 3 | 3 | 0.0000828831 |
| Magnolia biondii | Chr01 | 2 | CH_mbi_542 | 3 | 4 | 0.000331223 |
| Marchantia polymorpha | scaffold_42 | 2 | CH_mpo_30 | 4 | 5 | 0.00000012086 |
| Nicotiana tabacum | Nitab4.5_0000205 | 2 | CH_nta_75 | 4 | 9 | 0.0000259676 |
| Olea europaea | chr1 | 2 | CH_oeu_283 | 3 | 3 | 0.00026583 |
| Oryza sativa ssp. japonica | chr01 | 2 | CH_osa_283 | 3 | 3 | 0.000166143 |
| Physcomitrium patens | Chr13 | 2 | CH_ppa_272 | 3 | 5 | 0.00055543 |
| Papaver somniferum | NC_039362.1 | 2 | CH_pso_449 | 3 | 3 | 0.0000955609 |
| Papaver somniferum | NC_039365.1 | 2 | CH_pso_450 | 3 | 3 | 0.0000955609 |
| Papaver somniferum | NC_039361.1 | 2 | CH_pso_600 | 3 | 4 | 0.000381952 |
| Rhododendron simsii | chr10 | 2 | CH_rsi_220 | 4 | 4 | 0.000000581071 |
| Salvia bowleyana | GWHASIU00000001 | 2 | CH_sbo_312 | 3 | 3 | 0.000106259 |
| Salvia bowleyana | GWHASIU00000005 | 2 | CH_sbo_313 | 3 | 3 | 0.000106259 |
| Sequoiadendron giganteum | chr8 | 2 | CH_sgi_1004 | 3 | 4 | 0.000130045 |
| Sequoiadendron giganteum | chr1 | 2 | CH_sgi_343 | 6 | 20 | 0.000000000773071 |
| Sequoiadendron giganteum | chr2 | 2 | CH_sgi_702 | 3 | 3 | 0.0000325333 |
| Solanum lycopersicum | SL4.0ch11 | 2 | CH_sly_450 | 3 | 3 | 0.000321407 |
| Solanum pennellii | Spenn-ch11 | 2 | CH_spe_399 | 3 | 3 | 0.000225766 |
| Solanum tuberosum | ST4.03ch11 | 2 | CH_stu_214 | 4 | 4 | 0.000000464569 |
| Trochodendron aralioides | group7 | 2 | CH_tar_458 | 3 | 3 | 0.000411324 |
| Vitis vinifera | chr1 | 2 | CH_vvi_35 | 8 | 9 | 3.21055e-18 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |