Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.Programmed Cell Death (PCD) system.PCD suppressor (BON)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Aquilegia oxysepala CHR02 1 CH_aox_306 2 2 0.000481193
Arabidopsis thaliana Chr5 1 CH_ath_323 2 2 0.000171895
Camellia sinensis var. sinensis Chr3 1 CH_camsi_123 5 21 0.0000000000377425
Capsicum annuum PGAv.1.6.scaffold305 1 CH_can_451 2 2 0.000826105
Chara braunii BFEA01000491 1 CH_cbr_6 5 12 0.00000000000333713
Carya illinoinensis Chr08 1 CH_cil_14 14 65 1.49446e-30
Citrullus lanatus CG_Chr05 1 CH_cla_178 2 2 0.000266134
Chlamydomonas reinhardtii chromosome_3 1 CH_cre_38 2 2 0.000113733
Daucus carota DCARv2_Chr6 1 CH_dca_383 2 2 0.000382665
Davidia involucrata GWHABJS00000005 1 CH_din_50 4 5 0.000000000131345
Erigeron canadensis Conyza_canadensis_scaffold:2 1 CH_eca_408 2 2 0.000269233
Fragaria vesca Fvb6 1 CH_fve_360 2 2 0.00017673
Glycine max Gm03 1 CH_gma_622 2 2 0.00079707
Gossypium raimondii Chr13 1 CH_gra_427 2 2 0.000536107
Lonicera japonica GWHAAZE00000007 1 CH_lonja_619 2 2 0.000598874
Malus domestica Chr12 1 CH_mdo_108 4 8 0.000000000171749
Pisum sativum chr3LG5 1 CH_psa_303 2 2 0.00015649
Phaseolus vulgaris Chr06 1 CH_pvu_431 2 2 0.000440836
Quercus lobata 3 1 CH_qlo_445 4 19 0.000000335321
Quercus lobata 3 1 CH_qlo_731 3 12 0.000105405
Rosa chinensis RcHm_v2.0_Chr3 1 CH_rch_175 4 8 0.000000000931068
Sechium edule LG11 1 CH_sed_236 3 30 0.00012378
Trochodendron aralioides group17 1 CH_tar_534 2 2 0.000600366
Theobroma cacao Chromosome_5 1 CH_tca_358 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG6 1 CH_tpr_88 3 3 0.0000000859546
Vitis vinifera chr14 1 CH_vvi_68 5 10 0.00000000000796649
Aquilegia oxysepala CHR02 2 CH_aox_306 2 2 0.000481193
Arabidopsis thaliana Chr5 2 CH_ath_323 2 2 0.000171895
Camellia sinensis var. sinensis Chr3 2 CH_camsi_123 5 21 0.0000000000377425
Capsicum annuum PGAv.1.6.scaffold305 2 CH_can_451 2 2 0.000826105
Chara braunii BFEA01000491 2 CH_cbr_6 5 12 0.00000000000333713
Carya illinoinensis Chr08 2 CH_cil_14 14 65 1.49446e-30
Citrullus lanatus CG_Chr05 2 CH_cla_178 2 2 0.000266134
Chlamydomonas reinhardtii chromosome_3 2 CH_cre_38 2 2 0.000113733
Daucus carota DCARv2_Chr6 2 CH_dca_383 2 2 0.000382665
Davidia involucrata GWHABJS00000005 2 CH_din_50 4 5 0.000000000131345
Erigeron canadensis Conyza_canadensis_scaffold:2 2 CH_eca_408 2 2 0.000269233
Fragaria vesca Fvb6 2 CH_fve_360 2 2 0.00017673
Glycine max Gm03 2 CH_gma_622 2 2 0.00079707
Gossypium raimondii Chr13 2 CH_gra_427 2 2 0.000536107
Lonicera japonica GWHAAZE00000007 2 CH_lonja_619 2 2 0.000598874
Malus domestica Chr12 2 CH_mdo_108 4 8 0.000000000171749
Pisum sativum chr3LG5 2 CH_psa_303 2 2 0.00015649
Phaseolus vulgaris Chr06 2 CH_pvu_431 2 2 0.000440836
Quercus lobata 3 2 CH_qlo_445 4 19 0.000000335321
Quercus lobata 3 2 CH_qlo_731 3 12 0.000105405
Rosa chinensis RcHm_v2.0_Chr3 2 CH_rch_175 4 8 0.000000000931068
Sechium edule LG11 2 CH_sed_236 3 30 0.00012378
Trochodendron aralioides group17 2 CH_tar_534 2 2 0.000600366
Theobroma cacao Chromosome_5 2 CH_tca_358 2 2 0.000219716
Trifolium pratense Tp57577_TGAC_v2_LG6 2 CH_tpr_88 3 3 0.0000000859546
Vitis vinifera chr14 2 CH_vvi_68 5 10 0.00000000000796649

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001