Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.circadian clock system.core oscillator protein (LHY/CCA1)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Acer truncatum chr5 1 CH_acertr_356 2 2 0.000070497
Brassica carinata ChrC06 1 CH_bca_208 3 3 0.0000000383844
Davidia involucrata GWHABJS00000020 1 CH_din_375 2 2 0.000150038
Gossypium raimondii Chr08 1 CH_gra_396 2 3 0.000482475
Helianthus annuus HanXRQChr09 1 CH_han_598 2 2 0.000231857
Helianthus annuus HanXRQChr15 1 CH_han_599 2 2 0.000231857
Phaseolus vulgaris Chr09 1 CH_pvu_445 2 3 0.000661214
Trochodendron aralioides group15 1 CH_tar_455 2 2 0.00036022
Zea mays 10 1 CH_zma_201 2 2 0.000153394
Acer truncatum chr5 2 CH_acertr_356 2 2 0.000070497
Brassica carinata ChrC06 2 CH_bca_208 3 3 0.0000000383844
Davidia involucrata GWHABJS00000020 2 CH_din_375 2 2 0.000150038
Gossypium hirsutum A12 2 CH_ghi_725 2 2 0.000400523
Gossypium raimondii Chr08 2 CH_gra_396 2 3 0.000482475
Helianthus annuus HanXRQChr09 2 CH_han_598 2 2 0.000231857
Helianthus annuus HanXRQChr15 2 CH_han_599 2 2 0.000231857
Phaseolus vulgaris Chr09 2 CH_pvu_445 2 3 0.000661214
Trochodendron aralioides group15 2 CH_tar_455 2 2 0.00036022
Zea mays 10 2 CH_zma_201 2 2 0.000153394

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001