Functional clusters

Information

  • Type MapMan
  • Description Multi-process regulation.TOR (Target Of Rapamycin) signalling.TOR kinase substrates.S6K-dependent protein translation regulator (MRF)

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Actinidia chinensis Lachesis_group9 1 CH_ach_274 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 1 CH_amhyb_77 4 59 0.00000405524
Amborella trichopoda AmTr_v1.0_scaffold00078 1 CH_atr_320 2 3 0.000714919
Brassica carinata ChrC06 1 CH_bca_223 3 3 0.0000000575765
Camellia sinensis var. sinensis Chr2 1 CH_camsi_913 2 4 0.000825322
Capsicum annuum PGAv.1.6.scaffold472 1 CH_can_354 2 2 0.000247831
Cardamine hirsuta Chr8 1 CH_chi_427 2 2 0.000691204
Davidia involucrata GWHABJS00000019 1 CH_din_511 2 2 0.000750188
Rosa chinensis RcHm_v2.0_Chr7 1 CH_rch_422 3 16 0.0000133412
Solanum lycopersicum SL4.0ch03 1 CH_sly_427 2 2 0.000176082
Solanum pennellii Spenn-ch03 1 CH_spe_375 2 2 0.000133437
Trochodendron aralioides group11 1 CH_tar_447 2 2 0.00036022
Trifolium pratense Tp57577_TGAC_v2_LG5 1 CH_tpr_327 2 2 0.000227092
Utricularia gibba unitig_21 1 CH_ugi_226 2 2 0.000220378
Vanilla planifolia CM028161.1 1 CH_vpl_270 2 2 0.000221664
Actinidia chinensis Lachesis_group9 2 CH_ach_274 2 2 0.000814819
Amaranthus hybridus AmaHy_arrow1_Scaffold_16 2 CH_amhyb_77 4 59 0.00000405524
Amborella trichopoda AmTr_v1.0_scaffold00078 2 CH_atr_320 2 3 0.000714919
Brassica carinata ChrC06 2 CH_bca_223 3 3 0.0000000575765
Camellia sinensis var. sinensis Chr2 2 CH_camsi_913 2 4 0.000825322
Capsicum annuum PGAv.1.6.scaffold472 2 CH_can_354 2 2 0.000247831
Cardamine hirsuta Chr8 2 CH_chi_427 2 2 0.000691204
Davidia involucrata GWHABJS00000019 2 CH_din_511 2 2 0.000750188
Rosa chinensis RcHm_v2.0_Chr7 2 CH_rch_422 3 16 0.0000133412
Solanum lycopersicum SL4.0ch03 2 CH_sly_427 2 2 0.000176082
Solanum pennellii Spenn-ch03 2 CH_spe_375 2 2 0.000133437
Trochodendron aralioides group11 2 CH_tar_447 2 2 0.00036022
Trifolium pratense Tp57577_TGAC_v2_LG5 2 CH_tpr_327 2 2 0.000227092
Utricularia gibba unitig_21 2 CH_ugi_226 2 2 0.000220378
Vanilla planifolia CM028161.1 2 CH_vpl_270 2 2 0.000221664

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001