Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p02890 Brassica napus
A02p06630 Brassica napus
A08p21640 Brassica napus
Aa31LG1G12160 Aethionema arabicum
Aa31LG1G12170 Aethionema arabicum
Aa31LG1G12200 Aethionema arabicum
Aa31LG6G12760 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2196 Anthoceros agrestis
Actinidia03765 Actinidia chinensis
Actinidia17401 Actinidia chinensis
Actinidia17402 Actinidia chinensis
Actinidia17403 Actinidia chinensis
Actinidia29768 Actinidia chinensis
Actinidia29769 Actinidia chinensis
Actinidia37951 Actinidia chinensis
Actinidia37952 Actinidia chinensis
Actinidia37953 Actinidia chinensis
Ah.01g007880 Amaranthus hybridus
Ah.02g129100 Amaranthus hybridus
Ah.03g134280 Amaranthus hybridus
Ah.04g153590 Amaranthus hybridus
AL7G15270 Arabidopsis lyrata
AL8G36630 Arabidopsis lyrata
Aqoxy4G03122 Aquilegia oxysepala
Aqoxy4G03124 Aquilegia oxysepala
Aqoxy5G00747 Aquilegia oxysepala
Aqoxy5G01098 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.248CB6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.32E6CA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.9K73PE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BXI6FM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.E1FMMY Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FL0A4X Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.FVA0CM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.J6X5FL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NH5KQA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.P9ZJRF Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.XNR9AR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZV3AQA Arachis hypogaea
AT4G35800 Arabidopsis thaliana
AT5G60040 Arabidopsis thaliana
ATR0594G163 Amborella trichopoda
ATR0661G313 Amborella trichopoda
Atru.chr3.3760 Acer truncatum
Atru.chr3.3761 Acer truncatum
Atru.chr3.3762 Acer truncatum
Atru.chr3.3763 Acer truncatum
Atru.chr3.909 Acer truncatum
Atru.chr3.910 Acer truncatum
Atru.chr3.911 Acer truncatum
AUR62006512 Chenopodium quinoa
AUR62025018 Chenopodium quinoa
AUR62026224 Chenopodium quinoa
AUR62026407 Chenopodium quinoa
AUR62035416 Chenopodium quinoa
AUR62035701 Chenopodium quinoa
BcaB02g11519 Brassica carinata
BcaB05g22610 Brassica carinata
BcaC01g00521 Brassica carinata
BcaC01g00522 Brassica carinata
BcaC07g38102 Brassica carinata
BcaNung00792 Brassica carinata
BcaNung04874 Brassica carinata
BcaNung05725 Brassica carinata
BolC2t07289H Brassica oleracea
BolC3t20350H Brassica oleracea
BolC8t48523H Brassica oleracea
BraA01t00274Z Brassica rapa
BraA02t05745Z Brassica rapa
BraA08t34114Z Brassica rapa
C01p03210 Brassica napus
C02p11920 Brassica napus
C03p80930 Brassica napus
CAN.G1190.18 Capsicum annuum
CAN.G1218.8 Capsicum annuum
CAN.G1249.2 Capsicum annuum
CAN.G133.5 Capsicum annuum
CAN.G183.26 Capsicum annuum
CAN.G281.11 Capsicum annuum
CAN.G348.5 Capsicum annuum
CAN.G571.10 Capsicum annuum
CAN.G62.8 Capsicum annuum
CAN.G84.13 Capsicum annuum
CAN.G843.58 Capsicum annuum
CAN.G88.7 Capsicum annuum
CAN.G890.26 Capsicum annuum
CANSAT56G4454 Cannabis sativa
CARHR244170 Cardamine hirsuta
CARHR273660 Cardamine hirsuta
Carub.0007s0443 Capsella rubella
Carub.0008s2074 Capsella rubella
Ca_19216_v3 Cicer arietinum L.
Ca_24944_v3 Cicer arietinum L.
CBR_g21008 Chara braunii
CBR_g42147 Chara braunii
Cc00_g14860 Coffea canephora
Cc00_g14880 Coffea canephora
Cc01_g11950 Coffea canephora
Cc07_g11330 Coffea canephora
Cc07_g11340 Coffea canephora
Cc08_g04850 Coffea canephora
Cc08_g04860 Coffea canephora
Cc09_g09200 Coffea canephora
Cc09_g09210 Coffea canephora
CDE02G1347 Ceratophyllum demersum
CDE02G3052 Ceratophyllum demersum
CDE04G2464 Ceratophyllum demersum
Cfa007031 Carpinus fangiana
Cfa011405 Carpinus fangiana
Cfa021868 Carpinus fangiana
Ciclev10001675m.g Citrus clementina
Ciclev10004088m.g Citrus clementina
Ciclev10024686m.g Citrus clementina
Ciclev10027681m.g Citrus clementina
CiPaw.07G063400 Carya illinoinensis
CiPaw.14G074800 Carya illinoinensis
ClCG03G002130 Citrullus lanatus
ClCG03G002140 Citrullus lanatus
ClCG10G000460 Citrullus lanatus
COL.COLO4_14804 Corchorus olitorius
COL.COLO4_18403 Corchorus olitorius
COL.COLO4_22497 Corchorus olitorius
Cpa.g.sc6.315 Carica papaya
Cpa.g.sc7.208 Carica papaya
Cpa.g.sc7.210 Carica papaya
Cre03.g165750 Chlamydomonas reinhardtii
Cre16.g680900 Chlamydomonas reinhardtii
CsaV3_1G012790 Cucumis sativus L.
CsaV3_3G000490 Cucumis sativus L.
CSS0025979 Camellia sinensis var. sinensis
CSS0032530 Camellia sinensis var. sinensis
CSS0034780 Camellia sinensis var. sinensis
CSS0035598 Camellia sinensis var. sinensis
CSS0036491 Camellia sinensis var. sinensis
DCAR_016740 Daucus carota
DCAR_018871 Daucus carota
Dinv03761 Davidia involucrata
Dinv27600 Davidia involucrata
Dinv27601 Davidia involucrata
Dinv27602 Davidia involucrata
Dinv31892 Davidia involucrata
Dinv39555 Davidia involucrata
Dinv40146 Davidia involucrata
Duzib145G0004 Durio zibethinus
Duzib150G0751 Durio zibethinus
Duzib187G1668 Durio zibethinus
ECA233G0514 Erigeron canadensis
ECA233G1127 Erigeron canadensis
ECA233G2080 Erigeron canadensis
ECA233G4378 Erigeron canadensis
ECA233G5495 Erigeron canadensis
ECA247G0560 Erigeron canadensis
ECA247G3915 Erigeron canadensis
EL10Ac1g02243 Beta vulgaris
EL10Ac3g06609 Beta vulgaris
EL10Ac6g13333 Beta vulgaris
Eucgr.F01570 Eucalyptus grandis
Eucgr.I02304 Eucalyptus grandis
Eucgr.J02108 Eucalyptus grandis
FAN02G0259 Fragaria x ananassa
FAN02G1542 Fragaria x ananassa
FAN02G2221 Fragaria x ananassa
FAN11G0447 Fragaria x ananassa
FAN11G3166 Fragaria x ananassa
FAN14G3166 Fragaria x ananassa
FAN14G3914 Fragaria x ananassa
FAN16G3688 Fragaria x ananassa
FAN19G0156 Fragaria x ananassa
FAN19G0561 Fragaria x ananassa
FAN19G2586 Fragaria x ananassa
FAN21G2820 Fragaria x ananassa
FAN23G0813 Fragaria x ananassa
FAN23G1904 Fragaria x ananassa
FAN26G0663 Fragaria x ananassa
FAN26G2926 Fragaria x ananassa
FAN26G3056 Fragaria x ananassa
FAN28G1830 Fragaria x ananassa
FAN28G2440 Fragaria x ananassa
FvH4_1g11070 Fragaria vesca
FvH4_3g34290 Fragaria vesca
FvH4_6g15630 Fragaria vesca
FvH4_6g15631 Fragaria vesca
Glyma.01G162200 Glycine max
Glyma.09G278900 Glycine max
Glyma.11G081200 Glycine max
Glyma.11G147317 Glycine max
Gohir.A02G174500 Gossypium hirsutum
Gohir.A03G036100 Gossypium hirsutum
Gohir.A11G171700 Gossypium hirsutum
Gohir.D03G005300 Gossypium hirsutum
Gohir.D03G132200 Gossypium hirsutum
Gohir.D11G178600 Gossypium hirsutum
Gorai.003G005700 Gossypium raimondii
Gorai.003G139100 Gossypium raimondii
Gorai.007G190500 Gossypium raimondii
GSVIVG01008740001 Vitis vinifera
GSVIVG01025079001 Vitis vinifera
HanXRQChr04g0106851 Helianthus annuus
HanXRQChr04g0107401 Helianthus annuus
HanXRQChr08g0230641 Helianthus annuus
Haze_03702 Corylus avellana
Haze_23976 Corylus avellana
Haze_26119 Corylus avellana
Haze_27089 Corylus avellana
Hma1.2p1_0746F.1_g212240 Hydrangea macrophylla
Hma1.2p1_1598F.1_g292950 Hydrangea macrophylla
HPP92_005962 Vanilla planifolia
HPP92_005963 Vanilla planifolia
HPP92_014402 Vanilla planifolia
HPP92_022752 Vanilla planifolia
HPP92_022754 Vanilla planifolia
Hund16621 Selenicereus undatus
Lalb_Chr01g0003921 Lupinus albus
Lalb_Chr09g0321431 Lupinus albus
Lalb_Chr16g0377361 Lupinus albus
Lalb_Chr16g0377371 Lupinus albus
Lalb_Chr17g0338771 Lupinus albus
Lalb_Chr17g0338781 Lupinus albus
Lj1g0011731 Lotus japonicus
Lj2g0016023 Lotus japonicus
Lj3A239G19 Lonicera japonica
Lj3C239T4 Lonicera japonica
Lj4C226G8 Lonicera japonica
Lj4C801G10 Lonicera japonica
Lj5g0025773 Lotus japonicus
Lj8A494G9 Lonicera japonica
Lj8A495T40 Lonicera japonica
Lsat_1_v5_gn_1_12220 Lactuca sativa
Lsat_1_v5_gn_2_6980 Lactuca sativa
Lsat_1_v5_gn_9_21100 Lactuca sativa
Manes.01G151000 Manihot esculenta
Manes.17G000400 Manihot esculenta
Mapoly0051s0017 Marchantia polymorpha
Mapoly0070s0048 Marchantia polymorpha
MBI02_g14196_MAGBIO Magnolia biondii
MBI02_g14197_MAGBIO Magnolia biondii
MBI05_g01299_MAGBIO Magnolia biondii
MBI11_g09467_MAGBIO Magnolia biondii
MBI18_g28895_MAGBIO Magnolia biondii
MBI19_g41372_MAGBIO Magnolia biondii
MBI19_g46471_MAGBIO Magnolia biondii
MCO05G255 Micromonas commoda
MCO15G374 Micromonas commoda
MD02G1123200 Malus domestica
MD02G1123300 Malus domestica
MD02G1123400 Malus domestica
MD02G1125800 Malus domestica
MD02G1125900 Malus domestica
MD02G1126000 Malus domestica
MD03G1106800 Malus domestica
MD09G1157000 Malus domestica
MD15G1237200 Malus domestica
Medtr4g061700 Medicago truncatula
Medtr4g061800 Medicago truncatula
Medtr5g023020 Medicago truncatula
MELO3C013741.2 Cucumis melo
MELO3C026854.2 Cucumis melo
Migut.A00876 Erythranthe guttata
Migut.C00025 Erythranthe guttata
Migut.N01734 Erythranthe guttata
MSTRG.17722 Avicennia marina
Nitab4.5_0001696g0010 Nicotiana tabacum
Nitab4.5_0001885g0030 Nicotiana tabacum
Nitab4.5_0001885g0040 Nicotiana tabacum
Nitab4.5_0004015g0070 Nicotiana tabacum
Nitab4.5_0004839g0020 Nicotiana tabacum
Nitab4.5_0006892g0040 Nicotiana tabacum
Nn2g12369 Nelumbo nucifera
Nn6g31908 Nelumbo nucifera
Oeu012551.1 Olea europaea
Oeu039718.1 Olea europaea
Oeu041542.1 Olea europaea
Oeu047346.1 Olea europaea
Os04g0492300 Oryza sativa ssp. japonica
Os05g0151000 Oryza sativa ssp. japonica
Os08g0155700 Oryza sativa ssp. japonica
Peaxi162Scf00328g00128 Petunia axillaris
Peaxi162Scf00616g00511 Petunia axillaris
Peaxi162Scf00616g00621 Petunia axillaris
Peaxi162Scf00616g00635 Petunia axillaris
PGR119G0284 Punica granatum
PGR119G1503 Punica granatum
PGSC0003DMG400003590 Solanum tuberosum
PGSC0003DMG402025354 Solanum tuberosum
Phvul.002G104500 Phaseolus vulgaris
Phvul.011G070100 Phaseolus vulgaris
Potri.001G341900 Populus trichocarpa
Potri.005G107600 Populus trichocarpa
Pp3c14_14540 Physcomitrium patens
Pp3c17_4860 Physcomitrium patens
Pp3c1_32300 Physcomitrium patens
PRCOL_00001662 Prasinoderma coloniale
PRCOL_00006783 Prasinoderma coloniale
Prupe.6G089600 Prunus persica
Prupe.7G175200 Prunus persica
Psat2g151880 Pisum sativum
Psat2g151920 Pisum sativum
Psat5g200440 Pisum sativum
Psat7g022280 Pisum sativum
Psat7g221400 Pisum sativum
PSO017G0220 Papaver somniferum
PSO017G3640 Papaver somniferum
PSO384G5084 Papaver somniferum
PSO478G0478 Papaver somniferum
PSO541G3277 Papaver somniferum
PSO675G5068 Papaver somniferum
PSO699G0040 Papaver somniferum
QL06p007429 Quercus lobata
QL06p007447 Quercus lobata
QL06p052087 Quercus lobata
QL06p052095 Quercus lobata
QL93p0200_0051 Quercus lobata
RcHm_v2.0_Chr2g0098321 Rosa chinensis
RcHm_v2.0_Chr2g0098331 Rosa chinensis
RcHm_v2.0_Chr3g0469301 Rosa chinensis
RcHm_v2.0_Chr3g0469321 Rosa chinensis
RcHm_v2.0_Chr5g0061861 Rosa chinensis
Rhsim01G0223300 Rhododendron simsii
Rhsim10G0205500 Rhododendron simsii
RhsimUnG0152400 Rhododendron simsii
Sabra05G0088100 Salix brachista
Sabra16G0221600 Salix brachista
SalBow5G1077 Salvia bowleyana
SalBow5G2035 Salvia bowleyana
Sc03g0003780 Simmondsia chinensis
Sc19g0005360 Simmondsia chinensis
Sed0006002 Sechium edule
Sed0007851 Sechium edule
SEGI_01707 Sequoiadendron giganteum
SEGI_03511 Sequoiadendron giganteum
SEGI_06135 Sequoiadendron giganteum
SEGI_11035 Sequoiadendron giganteum
SEGI_11307 Sequoiadendron giganteum
SEGI_13399 Sequoiadendron giganteum
SEGI_13624 Sequoiadendron giganteum
SEGI_16332 Sequoiadendron giganteum
SEGI_24133 Sequoiadendron giganteum
SEGI_24641 Sequoiadendron giganteum
SEGI_24851 Sequoiadendron giganteum
SEGI_25004 Sequoiadendron giganteum
SEGI_28960 Sequoiadendron giganteum
SEGI_34000 Sequoiadendron giganteum
SEGI_37638 Sequoiadendron giganteum
SGA_v2.0_scaffold110G31200 Striga asiatica
SGA_v2.0_scaffold116G32283 Striga asiatica
SGA_v2.0_scaffold127G34014 Striga asiatica
SGA_v2.0_scaffold15G07314 Striga asiatica
SHI06007 Sapria himalayana
SHI43201 Sapria himalayana
SMO143G0104 Selaginella moellendorffii
SMO203G0153 Selaginella moellendorffii
Solyc02g083220.2 Solanum lycopersicum
Solyc02g083350.4 Solanum lycopersicum
Solyc11g072730.2 Solanum lycopersicum
Sopen02g027960 Solanum pennellii
Sopen02g028130 Solanum pennellii
Sopen11g030400 Solanum pennellii
Sp6g21700 Schrenkiella parvula
Sp7g33590 Schrenkiella parvula
TAR376G0725 Trochodendron aralioides
TAR623G0006 Trochodendron aralioides
TAR628G0489 Trochodendron aralioides
THA.LOC104804281 Tarenaya hassleriana
THA.LOC104810826 Tarenaya hassleriana
Thecc.01G011300 Theobroma cacao
Thecc.03G011900 Theobroma cacao
Thecc.03G012000 Theobroma cacao
Thecc.09G333600 Theobroma cacao
Thecc.09G334000 Theobroma cacao
Thecc.09G334100 Theobroma cacao
Thhalv10012446m.g Eutrema salsugineum
Thhalv10024193m.g Eutrema salsugineum
TPR.G25137 Trifolium pratense
TPR.G2993 Trifolium pratense
TPR.G8519 Trifolium pratense
TWI09G0739 Tripterygium wilfordii
TWI75G1460 Tripterygium wilfordii
unitig_0.g551 Utricularia gibba
unitig_0.g552 Utricularia gibba
unitig_0.g553 Utricularia gibba
vmacro04378 Vaccinium macrocarpon
vmacro12980 Vaccinium macrocarpon
vmacro14493 Vaccinium macrocarpon
vmacro14494 Vaccinium macrocarpon
vmacro20497 Vaccinium macrocarpon
VMungo1127G0038 Vigna mungo
VMungo1127G1617 Vigna mungo
VMungo1215G1821 Vigna mungo
Zm00001eb078830 Zea mays
Zm00001eb312130 Zea mays
Zm00001eb416050 Zea mays

User provided reference genes

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