Gene: Zm00001eb416050

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb416050
  • Transcript Identifier Zm00001eb416050_T001
  • Gene Type Coding gene
  • Location 10 : 81051955-81060209 : positive

Gene Family Information

  • ID HOM05D000228
  • #Genes/#Species 1809/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb416050_T001
  • pid Zm00001eb416050_P001
  • uniprot A0A1D6J0A7
  • uniprot A0A1D6J0B7
  • uniprot P16024
  • uniprot A0A1D6J0B4
  • uniprot A0A3L6G7G7
  • uniprot A0A1D6J0B3
  • uniprot A0A1D6J0B6
  • uniprot K7TLU2
  • uniprot A0A1D6J0B1
  • uniprot Q71ET7
  • entrez 541967
  • refseq NP_001292746.1
  • refseq NM_001305817.1
  • V4_identifier Zm00001d024583

Descriptions

  • Description Zm00001e040236
  • Description DNA-directed RNA polymerase subunit
  • Description RNA polymerase II large subunit family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006366
IEA
GOA Databasetranscription by RNA polymerase II
GO:0006366
IEA
InterProtranscription by RNA polymerase II
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G35800
GO:0003899
IBA
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0001055
IBA
GOA DatabaseRNA polymerase II activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0000287
IEA
GOA Databasemagnesium ion binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
IEA
GOA Databasechloroplast
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G35800
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G35800
GO:0005665
IBA
GOA DatabaseRNA polymerase II, core complex
GO:0005634
IEA
GOA Databasenucleus
GO:0009536
IEA
GOA Databaseplastid

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044893 RNA polymerase Rpb1, clamp domain superfamily
IPR007073 RNA polymerase Rpb1, domain 7
IPR007081 RNA polymerase Rpb1, domain 5
IPR000684 RNA polymerase II, heptapeptide repeat, eukaryotic
IPR000722 RNA polymerase, alpha subunit
IPR038593 RNA polymerase Rpb1, domain 7 superfamily
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR006592 RNA polymerase, N-terminal
IPR007083 RNA polymerase Rpb1, domain 4
IPR007066 RNA polymerase Rpb1, domain 3
IPR007075 RNA polymerase Rpb1, domain 6
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR007080 RNA polymerase Rpb1, domain 1
Mapman id Description
15.1.2.1 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 1