Gene: FAN19G0561
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN19G0561
- Transcript Identifier FAN19G0561.1
- Gene Type Coding gene
- Location Fvb1-4 : 5178754-5183694 : negative
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D001545
- #Genes/#Species 391/100
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- id snap_masked-Fvb1-4-processed-gene-51.45.v1.0.a1
- pacid 50558523
Descriptions
- Description PF00623//PF04983//PF04990//PF04992//PF04998//PF05000 - RNA polymerase Rpb1, domain 2 (RNA_pol_Rpb1_2) // RNA polymerase Rpb1, domain 3 (RNA_pol_Rpb1_3) // RNA polymerase Rpb1, domain 7 (RNA_pol_Rpb1_7) // RNA polymerase Rpb1, domain 6 (RNA_pol_Rpb1_6) // RNA polymerase Rpb1, domain 5 (RNA_pol_Rpb1_5) // RNA polymerase Rpb1, domain 4 (RNA_pol_Rpb1_4)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007073 | RNA polymerase Rpb1, domain 7 |
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR000722 | RNA polymerase, alpha subunit |
| IPR007066 | RNA polymerase Rpb1, domain 3 |
| IPR007075 | RNA polymerase Rpb1, domain 6 |
| IPR006592 | RNA polymerase, N-terminal |
| IPR038593 | RNA polymerase Rpb1, domain 7 superfamily |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| Mapman id | Description |
|---|---|
| 15.1.2.1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 1 |