Gene: A01p02890
General Information
Structural Information
- Species Brassica napus
- Gene Identifier A01p02890
- Transcript Identifier A01p02890
- Gene Type Coding gene
- Location A01 : 1351835-1373408 : positive
Gene Family Information
- ID HOM05D000228
- #Genes/#Species 1809/100
- Phylogenetic origin
- ID ORTHO05D001545
- #Genes/#Species 391/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid A01p02890.1_BnaDAR
- v5 BnaA01g01700D
- single_cell_id A01p02890.1-BnaDAR
- ensembl GSBRNA2T00121430001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT4G35800 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT4G35800 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT4G35800 |
| GO:0005665 | ISO | PLAZA Integrative Orthology | RNA polymerase II, core complex | AT4G35800 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR038593 | RNA polymerase Rpb1, domain 7 superfamily |
| IPR001030 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain |
| IPR007075 | RNA polymerase Rpb1, domain 6 |
| IPR015931 | Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 |
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| IPR007073 | RNA polymerase Rpb1, domain 7 |
| IPR015928 | Aconitase/3-isopropylmalate dehydratase, swivel |
| IPR036008 | Aconitase, iron-sulfur domain |
| IPR006249 | Aconitase/Iron-responsive element-binding protein 2 |
| IPR007080 | RNA polymerase Rpb1, domain 1 |
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR000722 | RNA polymerase, alpha subunit |
| IPR006592 | RNA polymerase, N-terminal |
| IPR044893 | RNA polymerase Rpb1, clamp domain superfamily |
| IPR007066 | RNA polymerase Rpb1, domain 3 |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| IPR000573 | Aconitase A/isopropylmalate dehydratase small subunit, swivel domain |
| IPR044137 | Aconitase A, swivel domain |