Gene: BcaC01g00521
General Information
Structural Information
- Species Brassica carinata
- Gene Identifier BcaC01g00521
- Transcript Identifier BcaC01g00521
- Gene Type Coding gene
- Location ChrC01 : 5270234-5318485 : negative
Gene Family Information
- ID HOM05D000315
- #Genes/#Species 1462/97
- Phylogenetic origin
- ID ORTHO05D001545
- #Genes/#Species 391/100
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006351 | IEA | InterPro | transcription, DNA-templated | |
| GO:0046470 | ISO | PLAZA Homology (enrichment) | phosphatidylcholine metabolic process | HOM05D000315 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003677 | IEA | InterPro | DNA binding | |
| GO:0003899 | IEA | InterPro | DNA-directed 5'-3' RNA polymerase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005509 | ISO | PLAZA Homology (enrichment) | calcium ion binding | HOM05D000315 |
| GO:0004630 | ISO | PLAZA Homology (enrichment) | phospholipase D activity | HOM05D000315 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016020 | ISO | PLAZA Homology (enrichment) | membrane | HOM05D000315 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR007083 | RNA polymerase Rpb1, domain 4 |
| IPR007080 | RNA polymerase Rpb1, domain 1 |
| IPR038120 | RNA polymerase Rpb1, funnel domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR035892 | C2 domain superfamily |
| IPR001736 | Phospholipase D/Transphosphatidylase |
| IPR042102 | RNA polymerase Rpb1, domain 3 superfamily |
| IPR006592 | RNA polymerase, N-terminal |
| IPR000008 | C2 domain |
| IPR003954 | RNA recognition motif domain, eukaryote |
| IPR007073 | RNA polymerase Rpb1, domain 7 |
| IPR007075 | RNA polymerase Rpb1, domain 6 |
| IPR024632 | Phospholipase D, C-terminal |
| IPR044893 | RNA polymerase Rpb1, clamp domain superfamily |
| IPR007066 | RNA polymerase Rpb1, domain 3 |
| IPR038593 | RNA polymerase Rpb1, domain 7 superfamily |
| IPR007081 | RNA polymerase Rpb1, domain 5 |
| IPR000722 | RNA polymerase, alpha subunit |
| Mapman id | Description |
|---|---|
| 15.1.2.1 | RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 1 |