Gene: HPP92_014402

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_014402
  • Transcript Identifier Vpl07Ag14402.1
  • Gene Type Coding gene
  • Location CM028156.1 : 1717792-1723528 : positive

Gene Family Information

  • ID HOM05D000228
  • #Genes/#Species 1809/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl07Ag14402.1
  • pid KAG0472545.1

Descriptions

  • Description DNA-directed RNA polymerase subunit ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
InterProtranscription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G35800

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G35800
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT4G35800
GO:0005665
ISO
PLAZA Integrative OrthologyRNA polymerase II, core complex AT4G35800

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007066 RNA polymerase Rpb1, domain 3
IPR042102 RNA polymerase Rpb1, domain 3 superfamily
IPR038120 RNA polymerase Rpb1, funnel domain superfamily
IPR044893 RNA polymerase Rpb1, clamp domain superfamily
IPR007083 RNA polymerase Rpb1, domain 4
IPR007081 RNA polymerase Rpb1, domain 5
IPR007075 RNA polymerase Rpb1, domain 6
IPR007080 RNA polymerase Rpb1, domain 1
IPR000722 RNA polymerase, alpha subunit
IPR006592 RNA polymerase, N-terminal
Mapman id Description
15.1.2.1 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.Pol II catalytic components.subunit 1