Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p29900 Brassica napus
A10p07170 Brassica napus
Aa31LG7G10060 Aethionema arabicum
Aa31LG7G10080 Aethionema arabicum
Aa31LG8G6450 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.404 Anthoceros agrestis
Actinidia02440 Actinidia chinensis
Actinidia06213 Actinidia chinensis
Actinidia10220 Actinidia chinensis
Actinidia19296 Actinidia chinensis
Ah.01g007090 Amaranthus hybridus
Ah.03g144480 Amaranthus hybridus
Ah.15g099560 Amaranthus hybridus
AL1G52580 Arabidopsis lyrata
AL3G33120 Arabidopsis lyrata
Aqoxy1G00259 Aquilegia oxysepala
Aqoxy6G02485 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.AV62L1 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.D1D3TT Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.QJHX3I Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.R5JV3U Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S90AI0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SU0RK2 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VYP3BN Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZAPI4Q Arachis hypogaea
AT1G44910 Arabidopsis thaliana
AT3G19670 Arabidopsis thaliana
ATR0564G474 Amborella trichopoda
Atru.chr13.868 Acer truncatum
Atru.chr5.2293 Acer truncatum
AUR62022344 Chenopodium quinoa
AUR62027023 Chenopodium quinoa
AUR62030865 Chenopodium quinoa
AUR62034362 Chenopodium quinoa
BcaB06g26037 Brassica carinata
BcaB07g33906 Brassica carinata
BcaC05g28436 Brassica carinata
BcaC08g42888 Brassica carinata
BolC5t33242H Brassica oleracea
BolC6t35241H Brassica oleracea
BraA05t21837Z Brassica rapa
BraA10t42967Z Brassica rapa
C05p45140 Brassica napus
C06p01090 Brassica napus
CAN.G13382.1 Capsicum annuum
CAN.G134.140 Capsicum annuum
CAN.G134.145 Capsicum annuum
CAN.G134.147 Capsicum annuum
CAN.G134.148 Capsicum annuum
CAN.G134.150 Capsicum annuum
CAN.G134.153 Capsicum annuum
CAN.G134.154 Capsicum annuum
CAN.G134.155 Capsicum annuum
CAN.G134.156 Capsicum annuum
CAN.G134.158 Capsicum annuum
CAN.G1353.1 Capsicum annuum
CAN.G1353.13 Capsicum annuum
CAN.G1353.14 Capsicum annuum
CAN.G1353.15 Capsicum annuum
CAN.G1353.16 Capsicum annuum
CAN.G1353.18 Capsicum annuum
CAN.G1353.2 Capsicum annuum
CAN.G1353.20 Capsicum annuum
CAN.G1353.21 Capsicum annuum
CAN.G1353.24 Capsicum annuum
CAN.G1353.25 Capsicum annuum
CAN.G1353.28 Capsicum annuum
CAN.G1353.29 Capsicum annuum
CAN.G1353.30 Capsicum annuum
CAN.G1353.4 Capsicum annuum
CAN.G1353.5 Capsicum annuum
CAN.G1353.6 Capsicum annuum
CAN.G1353.8 Capsicum annuum
CAN.G1353.9 Capsicum annuum
CAN.G1579.11 Capsicum annuum
CAN.G1579.12 Capsicum annuum
CAN.G1579.13 Capsicum annuum
CAN.G1579.29 Capsicum annuum
CAN.G1703.10 Capsicum annuum
CAN.G1703.11 Capsicum annuum
CAN.G1703.13 Capsicum annuum
CAN.G1816.1 Capsicum annuum
CAN.G1833.7 Capsicum annuum
CAN.G2318.1 Capsicum annuum
CAN.G2318.2 Capsicum annuum
CAN.G2494.1 Capsicum annuum
CAN.G309.102 Capsicum annuum
CAN.G309.104 Capsicum annuum
CAN.G309.106 Capsicum annuum
CAN.G309.109 Capsicum annuum
CAN.G309.112 Capsicum annuum
CAN.G309.115 Capsicum annuum
CAN.G309.116 Capsicum annuum
CAN.G309.117 Capsicum annuum
CAN.G309.120 Capsicum annuum
CAN.G309.129 Capsicum annuum
CAN.G309.131 Capsicum annuum
CAN.G309.136 Capsicum annuum
CAN.G309.137 Capsicum annuum
CAN.G309.138 Capsicum annuum
CAN.G309.139 Capsicum annuum
CAN.G309.145 Capsicum annuum
CAN.G309.147 Capsicum annuum
CAN.G309.149 Capsicum annuum
CAN.G309.93 Capsicum annuum
CAN.G309.95 Capsicum annuum
CAN.G309.96 Capsicum annuum
CAN.G309.98 Capsicum annuum
CAN.G575.100 Capsicum annuum
CAN.G575.101 Capsicum annuum
CAN.G575.106 Capsicum annuum
CAN.G575.107 Capsicum annuum
CAN.G575.130 Capsicum annuum
CAN.G575.139 Capsicum annuum
CAN.G575.140 Capsicum annuum
CAN.G885.4 Capsicum annuum
CANSAT25G3132 Cannabis sativa
CANSAT56G3433 Cannabis sativa
CARHR036140 Cardamine hirsuta
CARHR095130 Cardamine hirsuta
Carub.0001s3541 Capsella rubella
Carub.0003s1955 Capsella rubella
Ca_06979_v3 Cicer arietinum L.
CBR_g3786 Chara braunii
Cc02_g20040 Coffea canephora
Cc02_g20050 Coffea canephora
Cc10_g07610 Coffea canephora
Cc10_g07620 Coffea canephora
CDE01G0825 Ceratophyllum demersum
CDE02G0652 Ceratophyllum demersum
CDE02G1107 Ceratophyllum demersum
CDE04G0186 Ceratophyllum demersum
CDE04G3225 Ceratophyllum demersum
Cfa004700 Carpinus fangiana
Cfa013740 Carpinus fangiana
Cfa026575 Carpinus fangiana
Ciclev10027732m.g Citrus clementina
Ciclev10027741m.g Citrus clementina
CiPaw.05G020700 Carya illinoinensis
CiPaw.08G052200 Carya illinoinensis
ClCG05G026560 Citrullus lanatus
ClCG10G010050 Citrullus lanatus
COL.COLO4_28463 Corchorus olitorius
COL.COLO4_28464 Corchorus olitorius
COL.COLO4_32485 Corchorus olitorius
Cpa.g.c35142 Carica papaya
Cpa.g.sc1890.1 Carica papaya
Cpa.g.sc91.56 Carica papaya
Cpa.g.sc91.57 Carica papaya
Cre07.g351000 Chlamydomonas reinhardtii
CsaV3_4G000090 Cucumis sativus L.
CsaV3_4G035260 Cucumis sativus L.
CSS0035447 Camellia sinensis var. sinensis
CSS0050419 Camellia sinensis var. sinensis
DCAR_020063 Daucus carota
DCAR_028524 Daucus carota
Dinv09538 Davidia involucrata
Dinv44932 Davidia involucrata
Duzib093G1412 Durio zibethinus
Duzib116G0418 Durio zibethinus
Duzib132G0903 Durio zibethinus
ECA246G1033 Erigeron canadensis
ECA247G1183 Erigeron canadensis
EL10Ac1g01692 Beta vulgaris
EL10Ac3g06151 Beta vulgaris
EL10Ac9g22179 Beta vulgaris
Eucgr.F02226 Eucalyptus grandis
Eucgr.G01189 Eucalyptus grandis
FAN15G2976 Fragaria x ananassa
FAN15G3319 Fragaria x ananassa
FAN20G2095 Fragaria x ananassa
FAN20G2176 Fragaria x ananassa
FAN24G0370 Fragaria x ananassa
FAN24G0734 Fragaria x ananassa
FAN24G2311 Fragaria x ananassa
FAN27G2083 Fragaria x ananassa
FAN27G3457 Fragaria x ananassa
FvH4_2g03330 Fragaria vesca
FvH4_2g03361 Fragaria vesca
FvH4_2g32680 Fragaria vesca
Glyma.10G255700 Glycine max
Glyma.14G089078 Glycine max
Glyma.17G233000 Glycine max
Glyma.20G135800 Glycine max
Gohir.A04G118000 Gossypium hirsutum
Gohir.A06G025500 Gossypium hirsutum
Gohir.D04G159700 Gossypium hirsutum
Gohir.D06G022600 Gossypium hirsutum
Gorai.010G027200 Gossypium raimondii
Gorai.012G147100 Gossypium raimondii
GSVIVG01009302001 Vitis vinifera
HanXRQChr10g0295361 Helianthus annuus
HanXRQChr13g0402331 Helianthus annuus
Haze_10301 Corylus avellana
Haze_10302 Corylus avellana
Haze_22392 Corylus avellana
Haze_22400 Corylus avellana
Hma1.2p1_0661F.1_g198110 Hydrangea macrophylla
HPP92_002487 Vanilla planifolia
HPP92_012932 Vanilla planifolia
Hund00421 Selenicereus undatus
Hund05277 Selenicereus undatus
Lalb_Chr02g0144901 Lupinus albus
Lalb_Chr06g0164981 Lupinus albus
Lalb_Chr22g0355781 Lupinus albus
Lj4C75G10 Lonicera japonica
Lj5g0012181 Lotus japonicus
Lj5g0025981 Lotus japonicus
Lj9A337T45 Lonicera japonica
Lj9A337T46 Lonicera japonica
Lsat_1_v5_gn_1_581 Lactuca sativa
Lsat_1_v5_gn_2_10820 Lactuca sativa
Lsat_1_v5_gn_4_169241 Lactuca sativa
Lsat_1_v5_gn_6_108420 Lactuca sativa
Lsat_1_v5_gn_6_111581 Lactuca sativa
Manes.10G086900 Manihot esculenta
Manes.18G049300 Manihot esculenta
Mapoly0028s0110 Marchantia polymorpha
MCO06G173 Micromonas commoda
MD05G1105600 Malus domestica
MD08G1078500 Malus domestica
MD15G1065300 Malus domestica
Medtr1g017520 Medicago truncatula
Medtr1g106025 Medicago truncatula
MELO3C016837.2 Cucumis melo
MELO3C018022.2 Cucumis melo
Migut.N01126 Erythranthe guttata
Migut.N02796 Erythranthe guttata
MSTRG.27767 Avicennia marina
Nitab4.5_0000001g0490 Nicotiana tabacum
Nitab4.5_0000001g0500 Nicotiana tabacum
Nitab4.5_0000054g0070 Nicotiana tabacum
Nitab4.5_0001093g0090 Nicotiana tabacum
Nitab4.5_0005762g0010 Nicotiana tabacum
Nn5g30660 Nelumbo nucifera
Nn6g34523 Nelumbo nucifera
Oeu037290.1 Olea europaea
Oeu037291.1 Olea europaea
Oeu047227.1 Olea europaea
Oeu053643.2 Olea europaea
Os01g0532200 Oryza sativa ssp. japonica
Peaxi162Scf00152g00644 Petunia axillaris
Peaxi162Scf00152g00645 Petunia axillaris
Peaxi162Scf00453g00029 Petunia axillaris
PGR031G3281 Punica granatum
PGR042G2127 Punica granatum
Phvul.001G029800 Phaseolus vulgaris
Phvul.007G047100 Phaseolus vulgaris
Potri.001G289800 Populus trichocarpa
Potri.002G115501 Populus trichocarpa
Potri.009G085400 Populus trichocarpa
Potri.014G013100 Populus trichocarpa
Pp3c19_9950 Physcomitrium patens
Pp3c22_21780 Physcomitrium patens
Prupe.1G419400 Prunus persica
Prupe.8G150300 Prunus persica
Psat2g091080 Pisum sativum
Psat2g091120 Pisum sativum
Psat2g118720 Pisum sativum
Psat2g118760 Pisum sativum
Psat5g285400 Pisum sativum
Psat6g017320 Pisum sativum
Psat6g017360 Pisum sativum
Psat6g213120 Pisum sativum
Psat7g042200 Pisum sativum
Psat7g231280 Pisum sativum
PSO017G4256 Papaver somniferum
PSO170G6386 Papaver somniferum
PSO541G5272 Papaver somniferum
QL12p038595 Quercus lobata
QL12p038606 Quercus lobata
QL12p038612 Quercus lobata
RcHm_v2.0_Chr4g0400681 Rosa chinensis
RcHm_v2.0_Chr6g0248471 Rosa chinensis
RcHm_v2.0_Chr6g0309991 Rosa chinensis
Rhsim06G0064500 Rhododendron simsii
RhsimUnG0041000 Rhododendron simsii
RhsimUnG0123000 Rhododendron simsii
Sabra09G0065600 Salix brachista
Sabra14G0007900 Salix brachista
Sabra16G0181400 Salix brachista
SalBow2G1157 Salvia bowleyana
SalBow4G0931 Salvia bowleyana
SalBow6G3191 Salvia bowleyana
SalBow6G6764 Salvia bowleyana
Sc18g0007360 Simmondsia chinensis
Sc26g0004230 Simmondsia chinensis
Sed0000428 Sechium edule
Sed0026244 Sechium edule
SEGI_00144 Sequoiadendron giganteum
SEGI_05969 Sequoiadendron giganteum
SEGI_18842 Sequoiadendron giganteum
SGA_v2.0_scaffold152G36831 Striga asiatica
SGA_v2.0_scaffold219G42539 Striga asiatica
SMO367G1015 Selaginella moellendorffii
Solyc07g022760.4 Solanum lycopersicum
Solyc11g044340.3 Solanum lycopersicum
Sopen07g011950 Solanum pennellii
Sopen11g019850 Solanum pennellii
Sp1g33780 Schrenkiella parvula
Sp3g17700 Schrenkiella parvula
TAR381G0254 Trochodendron aralioides
TAR625G1475 Trochodendron aralioides
TAR625G1532 Trochodendron aralioides
THA.LOC104807020 Tarenaya hassleriana
THA.LOC104826497 Tarenaya hassleriana
Thecc.02G119900 Theobroma cacao
Thecc.08G084800 Theobroma cacao
Thhalv10011212m.g Eutrema salsugineum
Thhalv10019995m.g Eutrema salsugineum
TPR.G21140 Trifolium pratense
TWI56G0554 Tripterygium wilfordii
TWI59G0753 Tripterygium wilfordii
unitig_26.g9560 Utricularia gibba
unitig_578.g16173 Utricularia gibba
unitig_8.g4854 Utricularia gibba
unitig_8.g4855 Utricularia gibba
vmacro01946 Vaccinium macrocarpon
vmacro21418 Vaccinium macrocarpon
VMungo0647G0326 Vigna mungo
VMungo0647G1848 Vigna mungo
VMungo0720G0973 Vigna mungo
Zm00001eb162910 Zea mays
Zm00001eb162920 Zea mays

User provided reference genes

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