Gene: CAN.G1703.13
General Information
Structural Information
- Species Capsicum annuum
- Gene Identifier CAN.G1703.13
- Transcript Identifier CAN.T1703.13
- Gene Type Coding gene
- Location PGAv.1.6.scaffold1703 : 106756-111537 : negative
Gene Family Information
- ID HOM05D002048
- #Genes/#Species 324/96
- Phylogenetic origin
- ID ORTHO05D002146
- #Genes/#Species 312/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id CA.PGAv.1.6.scaffold1703.13
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome | |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT3G19670 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070063 | ISO | PLAZA Integrative Orthology | RNA polymerase binding | AT3G19670 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D002048 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G19670 |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT1G44910 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G44910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.1.5.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40A/B) |