Gene: CAN.G1579.12

General Information

Structural Information

Species Capsicum annuum
Gene Identifier CAN.G1579.12
Transcript Identifier CAN.T1579.12
Gene Type Coding gene
Location PGAv.1.6.scaffold1579 : 105504-122150 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002048
#Genes/#Species 324/96
Phylogenetic origin

ID ORTHO05D002146
#Genes/#Species 312/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id CA.PGAv.1.6.scaffold1579.12

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT3G19670
GO:0045292	ISO	PLAZA Homology (enrichment)	mRNA cis splicing, via spliceosome	HOM05D002048

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0070063	ISO	PLAZA Integrative Orthology	RNA polymerase binding	AT3G19670

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G19670
GO:0016592	ISO	PLAZA Integrative Orthology	mediator complex	AT1G44910
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G44910

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001202	WW domain
IPR036517	FF domain superfamily
IPR036020	WW domain superfamily
IPR027988	Transcription factor BREVIS RADIX, N-terminal domain
IPR013591	Brevis radix (BRX) domain
IPR009091	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II
IPR002713	FF domain

Mapman id	Description
16.2.1.1.5.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40A/B)