Gene: A05p29900

General Information

Structural Information

Species Brassica napus
Gene Identifier A05p29900
Transcript Identifier A05p29900
Gene Type Coding gene
Location A05 : 33037158-33044742 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D002048
#Genes/#Species 324/96
Phylogenetic origin

ID ORTHO05D002146
#Genes/#Species 312/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

tid A05p29900.1_BnaDAR
v5 BnaA05g36840D
single_cell_id A05p29900.1-BnaDAR
ensembl GSBRNA2T00004038001

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0045292	IEA	InterPro	mRNA cis splicing, via spliceosome
GO:0008380	ISO	PLAZA Integrative Orthology	RNA splicing	AT3G19670

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0070063	ISO	PLAZA Integrative Orthology	RNA polymerase binding	AT3G19670

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT3G19670

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001202	WW domain
IPR036517	FF domain superfamily
IPR002713	FF domain
IPR036020	WW domain superfamily
IPR039726	Pre-mRNA-processing factor Prp40

Mapman id	Description
16.2.1.1.5.4	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40A/B)