Gene: PSO017G4256
General Information
Structural Information
- Species Papaver somniferum
- Gene Identifier PSO017G4256
- Transcript Identifier PSO017G4256.01
- Gene Type Coding gene
- Location NC_039362.1 : 165031634-165041775 : negative
Gene Family Information
- ID HOM05D002048
- #Genes/#Species 324/96
- Phylogenetic origin
- ID ORTHO05D002146
- #Genes/#Species 312/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid rna-XM_026532826.1
- pid XP_026388611.1
- id gene-LOC113283529
Descriptions
- product pre-mRNA-processing protein 40A-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0045292 | IEA | InterPro | mRNA cis splicing, via spliceosome | |
| GO:0008380 | ISO | PLAZA Integrative Orthology | RNA splicing | AT3G19670 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0070063 | ISO | PLAZA Integrative Orthology | RNA polymerase binding | AT3G19670 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT3G19670 |
| GO:0016592 | ISO | PLAZA Integrative Orthology | mediator complex | AT1G44910 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT1G44910 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 16.2.1.1.5.4 | RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).accessory protein activities.pre-mRNA-processing protein (PRP40A/B) |