Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A03p35660 Brassica napus
A03p36910 Brassica napus
A05p38150 Brassica napus
A05p40210 Brassica napus
Aa31LG3G4290 Aethionema arabicum
Aa31LG3G4300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.1231 Anthoceros agrestis
Actinidia00957 Actinidia chinensis
Actinidia03211 Actinidia chinensis
Actinidia13801 Actinidia chinensis
Actinidia13802 Actinidia chinensis
Actinidia13949 Actinidia chinensis
Actinidia33917 Actinidia chinensis
Ah.08g222850 Amaranthus hybridus
Ah.10g036630 Amaranthus hybridus
Ah.15g099420 Amaranthus hybridus
Ah.16g103660 Amaranthus hybridus
AL2G25710 Arabidopsis lyrata
AL3G19500 Arabidopsis lyrata
AL3G22660 Arabidopsis lyrata
Aqoxy2G00838 Aquilegia oxysepala
Aqoxy3G00076 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1Z8SFE Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.65U0MI Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.691U9V Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.AM2AK0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LW185J Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.PWM8ST Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8AGNQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.REKD2E Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S3M94I Arachis hypogaea
AT3G08530 Arabidopsis thaliana
AT3G11130 Arabidopsis thaliana
Atru.chr12.70 Acer truncatum
AUR62001618 Chenopodium quinoa
AUR62012270 Chenopodium quinoa
AUR62020160 Chenopodium quinoa
AUR62022907 Chenopodium quinoa
AUR62043571 Chenopodium quinoa
BcaB04g18624 Brassica carinata
BcaB04g21149 Brassica carinata
BcaB04g21252 Brassica carinata
BcaB06g25650 Brassica carinata
BcaC01g04143 Brassica carinata
BcaC01g04264 Brassica carinata
BcaC05g29403 Brassica carinata
BcaC05g29594 Brassica carinata
BcaC09g48156 Brassica carinata
BNapus_Darmor_BZH_scaffold_167p00010 Brassica napus
BNapus_Darmor_BZH_scaffold_167p00020 Brassica napus
BolC1t05334H Brassica oleracea
BolC3t16601H Brassica oleracea
BolC3t16733H Brassica oleracea
BolC5t34359H Brassica oleracea
BolC5t34568H Brassica oleracea
BraA01t04199Z Brassica rapa
BraA01t04337Z Brassica rapa
BraA03t12741Z Brassica rapa
BraA03t12854Z Brassica rapa
BraA05t22608Z Brassica rapa
C03p43310 Brassica napus
C03p44710 Brassica napus
C05p56960 Brassica napus
C05p59290 Brassica napus
CAN.G1230.18 Capsicum annuum
CAN.G1268.14 Capsicum annuum
CAN.G156.5 Capsicum annuum
CAN.G380.2 Capsicum annuum
CAN.G737.3 Capsicum annuum
CANSAT56G3925 Cannabis sativa
CARHR059660 Cardamine hirsuta
CARHR082840 Cardamine hirsuta
CARHR085720 Cardamine hirsuta
Carub.0001s0167 Capsella rubella
Carub.0003s0767 Capsella rubella
Carub.0003s1044 Capsella rubella
Ca_14962_v3 Cicer arietinum L.
Ca_15134_v3 Cicer arietinum L.
Ca_30997_v3 Cicer arietinum L.
CBR_g31057 Chara braunii
CBR_g46777 Chara braunii
CBR_g46780 Chara braunii
CBR_g46782 Chara braunii
CBR_g46784 Chara braunii
CBR_g5751 Chara braunii
Cc00_g21060 Coffea canephora
Cc02_g06250 Coffea canephora
CDE04G1682 Ceratophyllum demersum
CDE04G2862 Ceratophyllum demersum
CDE04G2897 Ceratophyllum demersum
CDE06G2472 Ceratophyllum demersum
Cfa001302 Carpinus fangiana
Cfa004840 Carpinus fangiana
Cfa011723 Carpinus fangiana
Cfa026880 Carpinus fangiana
Ciclev10030488m.g Citrus clementina
CiPaw.02G193600 Carya illinoinensis
CiPaw.02G193700 Carya illinoinensis
CiPaw.04G119800 Carya illinoinensis
CiPaw.13G074800 Carya illinoinensis
CiPaw.14G057500 Carya illinoinensis
ClCG11G006070 Citrullus lanatus
COL.COLO4_11099 Corchorus olitorius
COL.COLO4_25763 Corchorus olitorius
Cpa.g.sc19.158 Carica papaya
Cre02.g101400 Chlamydomonas reinhardtii
CsaV3_6G001890 Cucumis sativus L.
CSS0002703 Camellia sinensis var. sinensis
CSS0016403 Camellia sinensis var. sinensis
CSS0027006 Camellia sinensis var. sinensis
CSS0039399 Camellia sinensis var. sinensis
CSS0039595 Camellia sinensis var. sinensis
CSS0044696 Camellia sinensis var. sinensis
CSS0046031 Camellia sinensis var. sinensis
DCAR_011827 Daucus carota
DCAR_028582 Daucus carota
Dinv09636 Davidia involucrata
Dinv10606 Davidia involucrata
Dinv10607 Davidia involucrata
Dinv21747 Davidia involucrata
Duzib106G1565 Durio zibethinus
Duzib114G0136 Durio zibethinus
Duzib128G1879 Durio zibethinus
ECA232G3581 Erigeron canadensis
ECA233G1709 Erigeron canadensis
ECA233G5572 Erigeron canadensis
ECA238G4598 Erigeron canadensis
EL10Ac1g02105 Beta vulgaris
EL10Ac2g03199 Beta vulgaris
EL10Ac2g04853 Beta vulgaris
EL10Ac6g14284 Beta vulgaris
EL10Ac7g16200 Beta vulgaris
Eucgr.G03075 Eucalyptus grandis
Eucgr.J00193 Eucalyptus grandis
FAN01G3164 Fragaria x ananassa
FAN03G2492 Fragaria x ananassa
FAN06G2703 Fragaria x ananassa
FAN06G3688 Fragaria x ananassa
FAN10G0725 Fragaria x ananassa
FAN11G0459 Fragaria x ananassa
FAN16G3433 Fragaria x ananassa
FAN21G1219 Fragaria x ananassa
FAN25G3170 Fragaria x ananassa
FvH4_3g39020 Fragaria vesca
FvH4_7g24660 Fragaria vesca
Glyma.01G179300 Glycine max
Glyma.02G228400 Glycine max
Glyma.02G258200 Glycine max
Glyma.11G062900 Glycine max
Glyma.11G231100 Glycine max
Glyma.14G058300 Glycine max
Glyma.14G195400 Glycine max
Glyma.18G026000 Glycine max
Gohir.A05G330700 Gossypium hirsutum
Gohir.A06G162600 Gossypium hirsutum
Gohir.A10G239800 Gossypium hirsutum
Gohir.A13G014600 Gossypium hirsutum
Gohir.D03G059600 Gossypium hirsutum
Gohir.D04G068800 Gossypium hirsutum
Gohir.D04G124701 Gossypium hirsutum
Gohir.D05G303450 Gossypium hirsutum
Gohir.D06G168100 Gossypium hirsutum
Gohir.D09G088650 Gossypium hirsutum
Gohir.D10G251700 Gossypium hirsutum
Gohir.D13G015800 Gossypium hirsutum
Gorai.006G105100 Gossypium raimondii
Gorai.009G322700 Gossypium raimondii
Gorai.010G196100 Gossypium raimondii
Gorai.011G250100 Gossypium raimondii
Gorai.011G292200 Gossypium raimondii
Gorai.012G077900 Gossypium raimondii
Gorai.013G017300 Gossypium raimondii
Gorai.013G185400 Gossypium raimondii
GSVIVG01024708001 Vitis vinifera
GSVIVG01032792001 Vitis vinifera
HanXRQChr08g0221871 Helianthus annuus
HanXRQChr08g0235321 Helianthus annuus
HanXRQChr09g0251791 Helianthus annuus
HanXRQChr11g0328211 Helianthus annuus
HanXRQChr15g0496331 Helianthus annuus
Haze_17243 Corylus avellana
Haze_24361 Corylus avellana
Haze_26648 Corylus avellana
Hma1.2p1_0281F.1_g113260 Hydrangea macrophylla
Hma1.2p1_0602F.1_g187650 Hydrangea macrophylla
Hma1.2p1_2705F.1_g327170 Hydrangea macrophylla
HPP92_019716 Vanilla planifolia
Hund13877 Selenicereus undatus
Hund13878 Selenicereus undatus
Hund15915 Selenicereus undatus
Hund15916 Selenicereus undatus
Hund15917 Selenicereus undatus
Hund18833 Selenicereus undatus
Hund20985 Selenicereus undatus
Lalb_Chr04g0252151 Lupinus albus
Lalb_Chr08g0231661 Lupinus albus
Lalb_Chr10g0103461 Lupinus albus
Lalb_Chr10g0105171 Lupinus albus
Lalb_Chr11g0075011 Lupinus albus
Lalb_Chr17g0345211 Lupinus albus
Lj1C958T7 Lonicera japonica
Lj2C1085G9 Lonicera japonica
Lj6g0013068 Lotus japonicus
Lj6g0021217 Lotus japonicus
Lj8C64G13 Lonicera japonica
LjContig00141g0004901 Lotus japonicus
LjContig00141g0021388 Lotus japonicus
LjContig00357g0009242 Lotus japonicus
Lsat_1_v5_gn_2_124121 Lactuca sativa
Lsat_1_v5_gn_2_70120 Lactuca sativa
Lsat_1_v5_gn_3_123580 Lactuca sativa
Lsat_1_v5_gn_3_123600 Lactuca sativa
Lsat_1_v5_gn_4_137081 Lactuca sativa
Lsat_1_v5_gn_4_19600 Lactuca sativa
Lsat_1_v5_gn_5_139301 Lactuca sativa
Lsat_1_v5_gn_5_168980 Lactuca sativa
Lsat_1_v5_gn_5_185341 Lactuca sativa
Lsat_1_v5_gn_6_54601 Lactuca sativa
Lsat_1_v5_gn_6_61701 Lactuca sativa
Lsat_1_v5_gn_8_12740 Lactuca sativa
Lsat_1_v5_gn_8_158660 Lactuca sativa
Lsat_1_v5_gn_8_35820 Lactuca sativa
Lsat_1_v5_gn_9_30080 Lactuca sativa
Lsat_1_v5_gn_9_33080 Lactuca sativa
Lsat_1_v5_gn_9_55741 Lactuca sativa
Lsat_1_v5_gn_9_62220 Lactuca sativa
Manes.07G131400 Manihot esculenta
Manes.10G010500 Manihot esculenta
Mapoly0045s0097 Marchantia polymorpha
MBI02_g32968_MAGBIO Magnolia biondii
MBI03_g05135_MAGBIO Magnolia biondii
MBI03_g05136_MAGBIO Magnolia biondii
MBI03_g40818_MAGBIO Magnolia biondii
MBI03_g40819_MAGBIO Magnolia biondii
MBI03_g40820_MAGBIO Magnolia biondii
MBI03_g48195_MAGBIO Magnolia biondii
MBI03_g48196_MAGBIO Magnolia biondii
MBI05_g35510_MAGBIO Magnolia biondii
MBI05_g40696_MAGBIO Magnolia biondii
MBI06_g25995_MAGBIO Magnolia biondii
MBI11_g16036_MAGBIO Magnolia biondii
MBI12_g47013_MAGBIO Magnolia biondii
MBI13_g16082_MAGBIO Magnolia biondii
MBI13_g45115_MAGBIO Magnolia biondii
MBI14_g10648_MAGBIO Magnolia biondii
MBI14_g27757_MAGBIO Magnolia biondii
MBI14_g28588_MAGBIO Magnolia biondii
MBI14_g37917_MAGBIO Magnolia biondii
MBI15_g25332_MAGBIO Magnolia biondii
MBI15_g33261_MAGBIO Magnolia biondii
MBI16_g45579_MAGBIO Magnolia biondii
MBI17_g18137_MAGBIO Magnolia biondii
MBI17_g36952_MAGBIO Magnolia biondii
MBI18_g33078_MAGBIO Magnolia biondii
MBI19_g39898_MAGBIO Magnolia biondii
MBI19_g39899_MAGBIO Magnolia biondii
MD01G1154700 Malus domestica
MD03G1065300 Malus domestica
MD07G1223800 Malus domestica
MD11G1070100 Malus domestica
Medtr3g070940 Medicago truncatula
Medtr3g464720 Medicago truncatula
Medtr4g029740 Medicago truncatula
Medtr4g055633 Medicago truncatula
Medtr5g070480 Medicago truncatula
Medtr5g071210 Medicago truncatula
Medtr5g071270 Medicago truncatula
Medtr5g071790 Medicago truncatula
Medtr5g071810 Medicago truncatula
Medtr5g071833 Medicago truncatula
Medtr5g082900 Medicago truncatula
Medtr5g093130 Medicago truncatula
MELO3C008306.2 Cucumis melo
Migut.F00665 Erythranthe guttata
Migut.F00666 Erythranthe guttata
Migut.F01410 Erythranthe guttata
MSTRG.8342 Avicennia marina
Nitab4.5_0000487g0030 Nicotiana tabacum
Nitab4.5_0000683g0020 Nicotiana tabacum
Nitab4.5_0000789g0040 Nicotiana tabacum
Nitab4.5_0000797g0030 Nicotiana tabacum
Nitab4.5_0002701g0040 Nicotiana tabacum
Nitab4.5_0003391g0060 Nicotiana tabacum
Nn2g10901 Nelumbo nucifera
Nn2g13176 Nelumbo nucifera
Oeu004685.1 Olea europaea
Oeu011108.1 Olea europaea
Oeu038903.2 Olea europaea
Oeu040989.1 Olea europaea
Oeu043437.1 Olea europaea
Oeu045386.3 Olea europaea
Oeu056951.1 Olea europaea
Oeu059710.2 Olea europaea
Os11g0104866 Oryza sativa ssp. japonica
Os11g0104900 Oryza sativa ssp. japonica
Os12g0104766 Oryza sativa ssp. japonica
Peaxi162Scf00045g02530 Petunia axillaris
Peaxi162Scf00284g00818 Petunia axillaris
Peaxi162Scf00484g00020 Petunia axillaris
PGR044G2384 Punica granatum
PGR142G1255 Punica granatum
Phvul.001G244300 Phaseolus vulgaris
Phvul.006G069700 Phaseolus vulgaris
Phvul.008G222800 Phaseolus vulgaris
Potri.001G278800 Populus trichocarpa
Potri.008G070600 Populus trichocarpa
Potri.009G073300 Populus trichocarpa
Potri.010G186900 Populus trichocarpa
Pp3c10_13900 Physcomitrium patens
Pp3c1_37710 Physcomitrium patens
Pp3c2_3220 Physcomitrium patens
Pp3c3_31290 Physcomitrium patens
Pp3c6_9130 Physcomitrium patens
PRCOL_00002182 Prasinoderma coloniale
Prupe.2G252300 Prunus persica
Prupe.6G054300 Prunus persica
Psat0s3156g0080 Pisum sativum
Psat0s3156g0120 Pisum sativum
Psat2g031400 Pisum sativum
Psat2g056120 Pisum sativum
Psat3g154560 Pisum sativum
Psat4g050720 Pisum sativum
Psat4g050760 Pisum sativum
Psat4g190880 Pisum sativum
Psat5g066560 Pisum sativum
Psat5g129720 Pisum sativum
Psat5g155320 Pisum sativum
Psat7g160960 Pisum sativum
Psat7g169800 Pisum sativum
PSO210G4545 Papaver somniferum
PSO339G3323 Papaver somniferum
PSO339G4889 Papaver somniferum
PSO384G4745 Papaver somniferum
PSO801G0444 Papaver somniferum
QL01p039038 Quercus lobata
QL08p063391 Quercus lobata
RcHm_v2.0_Chr1g0370491 Rosa chinensis
RcHm_v2.0_Chr3g0465841 Rosa chinensis
RcHm_v2.0_Chr3g0478461 Rosa chinensis
RcHm_v2.0_Chr4g0426291 Rosa chinensis
RcHm_v2.0_Chr5g0057331 Rosa chinensis
RcHm_v2.0_Chr5g0070331 Rosa chinensis
Rhsim02G0063200 Rhododendron simsii
Rhsim02G0063700 Rhododendron simsii
Rhsim02G0063800 Rhododendron simsii
Rhsim02G0064600 Rhododendron simsii
Rhsim02G0064900 Rhododendron simsii
Rhsim02G0065200 Rhododendron simsii
Rhsim02G0065500 Rhododendron simsii
Rhsim02G0065800 Rhododendron simsii
Rhsim03G0145000 Rhododendron simsii
Rhsim06G0124400 Rhododendron simsii
Rhsim09G0178400 Rhododendron simsii
Rhsim10G0117700 Rhododendron simsii
Rhsim12G0068700 Rhododendron simsii
Rhsim12G0072600 Rhododendron simsii
Rhsim12G0072800 Rhododendron simsii
Rhsim12G0075700 Rhododendron simsii
RhsimUnG0153400 Rhododendron simsii
RhsimUnG0153600 Rhododendron simsii
Sabra08G0051900 Salix brachista
Sabra09G0055400 Salix brachista
Sabra10G0144100 Salix brachista
Sabra16G0172600 Salix brachista
SalBow5G0043 Salvia bowleyana
SalBow5G0106 Salvia bowleyana
Sc06g0008500 Simmondsia chinensis
Sc11g0005160 Simmondsia chinensis
Sc12g0000560 Simmondsia chinensis
Sed0008855 Sechium edule
Sed0014383 Sechium edule
SEGI_13966 Sequoiadendron giganteum
SEGI_17159 Sequoiadendron giganteum
SEGI_26489 Sequoiadendron giganteum
SEGI_27238 Sequoiadendron giganteum
SEGI_31026 Sequoiadendron giganteum
SEGI_31293 Sequoiadendron giganteum
SEGI_39539 Sequoiadendron giganteum
SGA_v2.0_scaffold44G16680 Striga asiatica
SGA_v2.0_scaffold60G20985 Striga asiatica
SMO143G0220 Selaginella moellendorffii
SMO262G0001 Selaginella moellendorffii
SMO340G0221 Selaginella moellendorffii
Solyc03g096000.3 Solanum lycopersicum
Solyc05g052510.4 Solanum lycopersicum
Solyc06g051310.3 Solanum lycopersicum
Sopen03g026100 Solanum pennellii
Sopen05g031050 Solanum pennellii
Sopen06g017260 Solanum pennellii
Sopen07g023930 Solanum pennellii
Sp3g07010 Schrenkiella parvula
Sp3g09440 Schrenkiella parvula
TAR369G0545 Trochodendron aralioides
TAR369G1150 Trochodendron aralioides
TAR623G0521 Trochodendron aralioides
TAR633G1991 Trochodendron aralioides
TAR636G2231 Trochodendron aralioides
THA.LOC104810110 Tarenaya hassleriana
THA.LOC104824328 Tarenaya hassleriana
THA.LOC104826847 Tarenaya hassleriana
Thecc.09G351500 Theobroma cacao
Thecc.10G014100 Theobroma cacao
Thhalv10005737m.g Eutrema salsugineum
Thhalv10019884m.g Eutrema salsugineum
Thhalv10019886m.g Eutrema salsugineum
TPR.G10302 Trifolium pratense
TPR.G11199 Trifolium pratense
TPR.G15888 Trifolium pratense
TPR.G29026 Trifolium pratense
TPR.G38449 Trifolium pratense
TPR.G5083 Trifolium pratense
TPR.G5099 Trifolium pratense
TPR.G5197 Trifolium pratense
TWI09G1586 Tripterygium wilfordii
TWI31G1166 Tripterygium wilfordii
TWI53G0096 Tripterygium wilfordii
TWI73G0535 Tripterygium wilfordii
vmacro03458 Vaccinium macrocarpon
vmacro06959 Vaccinium macrocarpon
vmacro10032 Vaccinium macrocarpon
vmacro10033 Vaccinium macrocarpon
vmacro10798 Vaccinium macrocarpon
VMungo0331G0709 Vigna mungo
VMungo0464G1128 Vigna mungo
VMungo0540G0217 Vigna mungo
VMungo0647G0095 Vigna mungo
VMungo0647G2110 Vigna mungo
VMungo0647G2194 Vigna mungo
VMungo1215G1497 Vigna mungo
VMungo1309G2037 Vigna mungo
VMungo1383G3483 Vigna mungo
Zm00001eb011500 Zea mays
Zm00001eb094250 Zea mays
Zm00001eb135020 Zea mays
Zm00001eb135030 Zea mays
Zm00001eb154320 Zea mays
Zm00001eb163250 Zea mays
Zm00001eb194950 Zea mays
Zm00001eb211210 Zea mays
Zm00001eb216730 Zea mays
Zm00001eb216740 Zea mays
Zm00001eb216750 Zea mays
Zm00001eb235110 Zea mays
Zm00001eb317870 Zea mays
Zm00001eb346630 Zea mays
Zm00001eb368890 Zea mays
Zm00001eb404830 Zea mays

User provided reference genes

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