Gene: vmacro03458
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro03458
- Transcript Identifier vmacro03458-RA
- Gene Type Coding gene
- Location chr9_Vaccinium_macrocarpon_Stevens_v1 : 14998506-15002873 : positive
Gene Family Information
- ID HOM05D001399
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D426974
- #Genes/#Species 1 / 1(orphan gene)
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro03458_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to CHC1: Clathrin heavy chain 1 (Arabidopsis thaliana OX=3702)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0032051 | ISO | PLAZA Homology (enrichment) | clathrin light chain binding | HOM05D001399 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D001399 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0071439 | ISO | PLAZA Homology (enrichment) | clathrin complex | HOM05D001399 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016025 | Clathrin heavy chain, N-terminal |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |