Gene: FAN06G3688
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN06G3688
- Transcript Identifier FAN06G3688.1
- Gene Type Coding gene
- Location Fvb7-2 : 24376940-24385743 : positive
Gene Family Information
- ID HOM05D001399
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001670
- #Genes/#Species 372/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id augustus_masked-Fvb7-2-processed-gene-243.9.v1.0.a1
- pacid 50492199
Descriptions
- Description PF00637//PF01394//PF09268//PF13672//PF13838 - Region in Clathrin and VPS (Clathrin) // Clathrin propeller repeat (Clathrin_propel) // Clathrin, heavy-chain linker (Clathrin-link) // Protein phosphatase 2C (PP2C_2) // Clathrin-H-link (Clathrin_H_link)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0016791 | IEA | InterPro | phosphatase activity | |
| GO:0032051 | ISO | PLAZA Homology (enrichment) | clathrin light chain binding | HOM05D001399 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D001399 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0071439 | ISO | PLAZA Homology (enrichment) | clathrin complex | HOM05D001399 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036457 | PPM-type phosphatase domain superfamily |
| IPR016024 | Armadillo-type fold |
| IPR015348 | Clathrin, heavy chain, linker, core motif |
| IPR016025 | Clathrin heavy chain, N-terminal |
| IPR022365 | Clathrin, heavy chain, propeller repeat |
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat |
| IPR001932 | PPM-type phosphatase domain |
| Mapman id | Description |
|---|---|
| 18.4.25.2.2 | Protein modification.phosphorylation.protein serine/threonine phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade B phosphatase |