Gene: Nitab4.5_0000797g0030
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000797g0030
- Transcript Identifier Nitab4.5_0000797g0030.1
- Gene Type Coding gene
- Location Nitab4.5_0000797 : 75351-89026 : negative
Gene Family Information
- ID HOM05D001399
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001670
- #Genes/#Species 372/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0000797g0030.1
- SR1-identifier Nta06g08530.1
Descriptions
- Description Tetratricopeptide-like helical, Armadillo-type fold, Clathrin, heavy chain, propeller repeat, Clathrin, heavy chain, propeller, N-terminal, Clathrin, heavy chain/VPS, 7-fold repeat, Clathrin, heavy chain, linker/propeller domain, Clathrin, heavy chain, linker, Clathrin, heavy chain, linker, core motif, Clathrin, heavy chain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0032051 | IEA | InterPro | clathrin light chain binding | |
| GO:0005515 | IEA | InterPro | protein binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0071439 | IEA | InterPro | clathrin complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016024 | Armadillo-type fold |
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat |
| IPR016025 | Clathrin heavy chain, N-terminal |
| IPR022365 | Clathrin, heavy chain, propeller repeat |
| IPR016341 | Clathrin, heavy chain |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR015348 | Clathrin, heavy chain, linker, core motif |
| Mapman id | Description |
|---|---|
| 22.3.1.1.1 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.heavy chain |