Gene: MSTRG.8342

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.8342
  • Transcript Identifier MSTRG.8342.1
  • Gene Type Coding gene
  • Location ScioBoG_102841_HRSCAF_103114 : 12782261-12788212 : positive

Gene Family Information

  • ID HOM05D001399
  • #Genes/#Species 447/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.8342.1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010118
ISO
PLAZA Integrative Orthologystomatal movement AT3G11130
GO:0072583
ISO
PLAZA Integrative Orthologyclathrin-dependent endocytosis AT3G11130
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G11130
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT3G11130
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
InterProintracellular protein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G08530
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G11130
GO:0005198
IEA
InterProstructural molecule activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G08530
GO:0032051
ISO
PLAZA Homology (enrichment)clathrin light chain binding HOM05D001399

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G11130
GO:0071439
ISO
PLAZA Homology (enrichment)clathrin complex HOM05D001399
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G08530
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G11130
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G08530
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G11130
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G11130
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G11130
GO:0030132
IEA
InterProclathrin coat of coated pit
GO:0030130
IEA
InterProclathrin coat of trans-Golgi network vesicle

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR016025 Clathrin heavy chain, N-terminal
IPR015348 Clathrin, heavy chain, linker, core motif
IPR022365 Clathrin, heavy chain, propeller repeat
Mapman id Description
35.1 not assigned.annotated