Gene: Sopen03g026100

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen03g026100
  • Transcript Identifier Sopen03g026100.1
  • Gene Type Coding gene
  • Location Spenn-ch03 : 60071233-60083694 : negative

Gene Family Information

  • ID HOM05D001399
  • #Genes/#Species 447/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen03g026100.1

Descriptions

  • Description Clathrin, heavy chain | FUNCTIONS IN: structural molecule activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: plasma membrane, vacuole | EXPRESSED IN: male gametophyte, guard cell, cultured cell, pollen tube | EXPRESSED DURING: L mature pollen stage, M germinated pollen stage | CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain , Clathrin, heavy chain, linker/propeller domain , Tetratricopeptide-like helical , Clathrin, heavy chain, propeller, N-terminal , Clathrin, heavy chain, linker, core motif , Clathrin, heavy chain, propeller repeat , Armadillo-type fold , Clathrin, heavy chain/VPS, 7-fold repeat | BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005198
IEA
InterProstructural molecule activity
GO:0005515
IEA
InterProprotein binding
GO:0032051
IEA
InterProclathrin light chain binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030130
IEA
InterProclathrin coat of trans-Golgi network vesicle
GO:0030132
IEA
InterProclathrin coat of coated pit
GO:0071439
IEA
InterProclathrin complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015348 Clathrin, heavy chain, linker, core motif
IPR016025 Clathrin heavy chain, N-terminal
IPR022365 Clathrin, heavy chain, propeller repeat
IPR016024 Armadillo-type fold
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR016341 Clathrin, heavy chain
Mapman id Description
22.3.1.1.1 Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.heavy chain