Gene: Lsat_1_v5_gn_5_139301

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_5_139301
  • Transcript Identifier Lsat_1_v5_gn_5_139301.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_5 : 267267539-267272033 : positive

Gene Family Information

  • ID HOM05D001399
  • #Genes/#Species 447/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_5_139301.v5
  • pacid 38968532

Descriptions

  • Description PF00637//PF01073 - Region in Clathrin and VPS (Clathrin) // 3-beta hydroxysteroid dehydrogenase/isomerase family (3Beta_HSD)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010118
ISO
PLAZA Integrative Orthologystomatal movement AT3G11130
GO:0072583
ISO
PLAZA Integrative Orthologyclathrin-dependent endocytosis AT3G11130
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G11130
GO:0006897
ISO
PLAZA Integrative Orthologyendocytosis AT3G11130
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0006694
IEA
InterProsteroid biosynthetic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G08530
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G11130
GO:0003854
IEA
InterPro3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0005198
ISO
PLAZA Homology (enrichment)structural molecule activity HOM05D001399
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT3G08530
GO:0032051
ISO
PLAZA Homology (enrichment)clathrin light chain binding HOM05D001399
GO:0016616
IEA
InterProoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005773
ISO
PLAZA Integrative Orthologyvacuole AT3G11130
GO:0071439
ISO
PLAZA Homology (enrichment)clathrin complex HOM05D001399
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G08530
GO:0030132
ISO
PLAZA Homology (enrichment)clathrin coat of coated pit HOM05D001399
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT3G11130
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G08530
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT3G11130
GO:0005774
ISO
PLAZA Integrative Orthologyvacuolar membrane AT3G11130
GO:0005794
ISO
PLAZA Integrative OrthologyGolgi apparatus AT3G11130
GO:0030130
ISO
PLAZA Homology (enrichment)clathrin coat of trans-Golgi network vesicle HOM05D001399

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016024 Armadillo-type fold
IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR036291 NAD(P)-binding domain superfamily
Mapman id Description
50.1.1 Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor