Gene: Sopen07g023930

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen07g023930
  • Transcript Identifier Sopen07g023930.1
  • Gene Type Coding gene
  • Location Spenn-ch07 : 69056830-69057242 : positive

Gene Family Information

  • ID HOM05D001399
  • #Genes/#Species 447/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen07g023930.1

Descriptions

  • Description Clathrin, heavy chain | FUNCTIONS IN: structural molecule activity, binding | INVOLVED IN: intracellular protein transport, vesicle-mediated transport | LOCATED IN: plasma membrane, chloroplast, membrane | EXPRESSED IN: guard cell, leaf | EXPRESSED DURING: seedling growth | CONTAINS InterPro DOMAIN/s: Clathrin, heavy chain , Clathrin, heavy chain, linker/propeller domain , Tetratricopeptide-like helical , Clathrin, heavy chain, propeller, N-terminal , Clathrin, heavy chain, linker, core motif , Clathrin, heavy chain, propeller repeat , Armadillo-type fold , Clathrin, heavy chain/VPS, 7-fold repeat | BEST Arabidopsis thaliana protein match is: Clathrin, heavy chain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006886
IEA
InterProintracellular protein transport
GO:0016192
IEA
InterProvesicle-mediated transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032051
ISO
PLAZA Homology (enrichment)clathrin light chain binding HOM05D001399
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D001399
GO:0005198
ISO
PLAZA Homology (enrichment)structural molecule activity HOM05D001399

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030130
ISO
PLAZA Homology (enrichment)clathrin coat of trans-Golgi network vesicle HOM05D001399
GO:0030132
ISO
PLAZA Homology (enrichment)clathrin coat of coated pit HOM05D001399
GO:0071439
ISO
PLAZA Homology (enrichment)clathrin complex HOM05D001399

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR016024 Armadillo-type fold
Mapman id Description
35.1 not assigned.annotated