Gene: TPR.G10302
General Information
Structural Information
- Species Trifolium pratense
- Gene Identifier TPR.G10302
- Transcript Identifier TPR.T10645
- Gene Type Coding gene
- Location Tp57577_TGAC_v2_scaf_566 : 108225-114298 : negative
Gene Family Information
- ID HOM05D001399
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001670
- #Genes/#Species 372/95
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Tp57577_TGAC_v2_mRNA10645.v2
- id Tp57577_TGAC_v2_gene10302.v2
- pacid 35981773
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0016567 | IEA | InterPro | protein ubiquitination |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005198 | IEA | InterPro | structural molecule activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0004842 | IEA | InterPro | ubiquitin-protein transferase activity | |
| GO:0032051 | ISO | PLAZA Homology (enrichment) | clathrin light chain binding | HOM05D001399 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle | |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0071439 | ISO | PLAZA Homology (enrichment) | clathrin complex | HOM05D001399 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR015348 | Clathrin, heavy chain, linker, core motif |
| IPR011989 | Armadillo-like helical |
| IPR000225 | Armadillo |
| IPR003613 | U box domain |
| IPR016025 | Clathrin heavy chain, N-terminal |
| IPR016024 | Armadillo-type fold |
| IPR022365 | Clathrin, heavy chain, propeller repeat |
| Mapman id | Description |
|---|---|
| 19.2.2.1.4.2.1 | Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.U-Box E3 ligase activities.group-II ligase |