Gene: ECA238G4598
General Information
Structural Information
- Species Erigeron canadensis
- Gene Identifier ECA238G4598
- Transcript Identifier ECA238G4598.1
- Gene Type Coding gene
- Location Conyza_canadensis_scaffold:6 : 41753816-41771054 : positive
Gene Family Information
- ID HOM05D001399
- #Genes/#Species 447/95
- Phylogenetic origin
- ID ORTHO05D001670
- #Genes/#Species 372/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- name g30712
- Alias g30712.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006897 | ISO | PLAZA Integrative Orthology | endocytosis | AT3G11130 |
| GO:0010118 | ISO | PLAZA Integrative Orthology | stomatal movement | AT3G11130 |
| GO:0072583 | ISO | PLAZA Integrative Orthology | clathrin-dependent endocytosis | AT3G11130 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT3G11130 |
| GO:0016192 | IEA | InterPro | vesicle-mediated transport | |
| GO:0006886 | IEA | InterPro | intracellular protein transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT3G08530 |
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT3G08530 |
| GO:0032051 | ISO | PLAZA Homology (enrichment) | clathrin light chain binding | HOM05D001399 |
| GO:0004377 | IEA | InterPro | GDP-Man:Man3GlcNAc2-PP-Dol alpha-1,2-mannosyltransferase activity | |
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0005198 | IEA | InterPro | structural molecule activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0071439 | ISO | PLAZA Homology (enrichment) | clathrin complex | HOM05D001399 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT3G08530 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT3G11130 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT3G08530 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT3G11130 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT3G11130 |
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT3G11130 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT3G11130 |
| GO:0030132 | IEA | InterPro | clathrin coat of coated pit | |
| GO:0030130 | IEA | InterPro | clathrin coat of trans-Golgi network vesicle |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001296 | Glycosyl transferase, family 1 |
| IPR015348 | Clathrin, heavy chain, linker, core motif |
| IPR016024 | Armadillo-type fold |
| IPR011990 | Tetratricopeptide-like helical domain superfamily |
| IPR038013 | ALG11 mannosyltransferase |
| IPR000547 | Clathrin, heavy chain/VPS, 7-fold repeat |
| IPR031814 | ALG11 mannosyltransferase, N-terminal |
| IPR016025 | Clathrin heavy chain, N-terminal |
| IPR022365 | Clathrin, heavy chain, propeller repeat |
| Mapman id | Description |
|---|---|
| 18.1.1.4.5 | Protein modification.glycosylation.N-linked glycosylation.dolichol-phosphate-linked oligosaccharide precursor assembly.alpha-1,2-mannosyltransferase (ALG11) |
| 22.3.1.1.1 | Vesicle trafficking.post-Golgi trafficking.clathrin coated vesicle (CCV) machinery.clathrin triskelion structure.heavy chain |