Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
vmacro07058 Vaccinium macrocarpon HOM05D005147 ORTHO05D006132 4.6e-35 150.6 72 100.0
Actinidia19646 Actinidia chinensis HOM05D005147 ORTHO05D006132 1.1e-31 139.4 71 88.7
Nn3g19309 Nelumbo nucifera HOM05D005147 ORTHO05D006132 1.8e-31 138.7 72 88.9
Lalb_Chr06g0168531 Lupinus albus HOM05D005147 ORTHO05D006132 2.4e-31 138.3 72 90.3
Glyma.10G171500 Glycine max HOM05D005147 ORTHO05D006132 4.0e-31 137.5 72 87.5
VMungo0720G1244 Vigna mungo HOM05D005147 ORTHO05D006132 4.0e-31 137.5 72 87.5
Lalb_Chr02g0149501 Lupinus albus HOM05D005147 ORTHO05D006132 5.3e-31 137.1 72 87.5
Phvul.007G117900 Phaseolus vulgaris HOM05D005147 ORTHO05D006132 5.3e-31 137.1 72 86.1
Actinidia05852 Actinidia chinensis HOM05D005147 ORTHO05D006132 6.9e-31 136.7 71 88.7
Dinv17137 Davidia involucrata HOM05D005147 ORTHO05D006132 9.0e-31 136.3 72 84.7
Lsat_1_v5_gn_1_127920 Lactuca sativa HOM05D005147 ORTHO05D006132 9.0e-31 136.3 72 86.1
Glyma.20G218800 Glycine max HOM05D005147 ORTHO05D006132 1.2e-30 136.0 72 86.1
Lj5g0011670 Lotus japonicus HOM05D005147 ORTHO05D006132 1.2e-30 136.0 72 86.1
TPR.G10532 Trifolium pratense HOM05D005147 ORTHO05D006132 1.5e-30 135.6 72 87.5
HanXRQChr16g0511771 Helianthus annuus HOM05D005147 ORTHO05D006132 2.0e-30 135.2 72 86.1
QL10p016598 Quercus lobata HOM05D005147 ORTHO05D006132 3.4e-30 134.4 71 87.3
CANSAT64G0126 Cannabis sativa HOM05D005147 ORTHO05D006132 4.5e-30 134.0 72 86.1
Gorai.003G087900 Gossypium raimondii HOM05D005147 ORTHO05D006132 5.8e-30 133.7 72 86.1
Ca_09963_v3 Cicer arietinum L. HOM05D005147 ORTHO05D006132 7.6e-30 133.3 72 84.7
Gohir.A02G107106 Gossypium hirsutum HOM05D005147 ORTHO05D006132 7.6e-30 133.3 72 86.1
Medtr1g078210 Medicago truncatula HOM05D005147 ORTHO05D006132 7.6e-30 133.3 72 84.7
CiPaw.08G111700 Carya illinoinensis HOM05D005147 ORTHO05D006132 1.0e-29 132.9 72 84.7
Duzib128G1295 Durio zibethinus HOM05D005147 ORTHO05D006132 1.0e-29 132.9 72 84.7
Thecc.07G106800 Theobroma cacao HOM05D005147 ORTHO05D006132 1.0e-29 132.9 72 86.1
Lj8A197T41 Lonicera japonica HOM05D005147 ORTHO05D006132 1.3e-29 132.5 72 81.9
MSTRG.27416 Avicennia marina HOM05D005147 ORTHO05D006132 1.7e-29 132.1 72 84.7
ClCG04G001690 Citrullus lanatus HOM05D005147 ORTHO05D006132 1.7e-29 132.1 72 81.9
MELO3C008955.2 Cucumis melo HOM05D005147 ORTHO05D006132 1.7e-29 132.1 72 81.9
CsaV3_4G030880 Cucumis sativus L. HOM05D005147 ORTHO05D006132 1.7e-29 132.1 72 81.9
Gohir.D03G072200 Gossypium hirsutum HOM05D005147 ORTHO05D006132 1.7e-29 132.1 72 84.7
GSVIVG01003992001 Vitis vinifera HOM05D005147 ORTHO05D006132 1.7e-29 132.1 71 84.5
GSVIVG01007182001 Vitis vinifera HOM05D005147 ORTHO05D006132 1.7e-29 132.1 71 84.5
Atru.chr2.212 Acer truncatum HOM05D005147 ORTHO05D006132 2.2e-29 131.7 72 79.2
Cfa006223 Carpinus fangiana HOM05D005147 ORTHO05D006132 2.2e-29 131.7 72 84.7
DCAR_023252 Daucus carota HOM05D005147 ORTHO05D006132 2.2e-29 131.7 72 83.3
Sed0015307 Sechium edule HOM05D005147 ORTHO05D006132 2.2e-29 131.7 72 83.3
Manes.13G000300 Manihot esculenta HOM05D005147 ORTHO05D006132 2.9e-29 131.3 72 83.3
Oeu040505.2 Olea europaea HOM05D005147 ORTHO05D006132 3.8e-29 131.0 72 81.9
unitig_747.g21462 Utricularia gibba HOM05D005147 ORTHO05D006132 3.8e-29 131.0 72 81.9
MD12G1261400 Malus domestica HOM05D005147 ORTHO05D006132 4.9e-29 130.6 72 81.9
Solyc11g008700.2 Solanum lycopersicum HOM05D005147 ORTHO05D006132 4.9e-29 130.6 71 83.1
Migut.F02087 Erythranthe guttata HOM05D005147 ORTHO05D006132 6.5e-29 130.2 72 83.3
Cc09_g04140 Coffea canephora HOM05D005147 ORTHO05D006132 8.4e-29 129.8 72 83.3
Haze_04617 Corylus avellana HOM05D005147 ORTHO05D006132 8.4e-29 129.8 72 81.9
TWI36G1457 Tripterygium wilfordii HOM05D005147 ORTHO05D006132 8.4e-29 129.8 72 81.9
ATR0743G159 Amborella trichopoda HOM05D005147 ORTHO05D006132 1.1e-28 129.4 72 80.6
MD00G1017100 Malus domestica HOM05D005147 ORTHO05D006132 1.1e-28 129.4 72 80.6
Sopen11g004480 Solanum pennellii HOM05D005147 ORTHO05D006132 1.4e-28 129.0 71 81.7
Prupe.6G365400 Prunus persica HOM05D005147 ORTHO05D006132 2.5e-28 128.3 72 79.2
Aqoxy3G00601 Aquilegia oxysepala HOM05D005147 ORTHO05D006132 3.2e-28 127.9 72 80.6
CSS0016526 Camellia sinensis var. sinensis HOM05D005147 ORTHO05D006132 3.2e-28 127.9 72 83.3
Nitab4.5_0001003g0200 Nicotiana tabacum HOM05D005147 ORTHO05D006132 3.2e-28 127.9 71 80.3
Nitab4.5_0003928g0030 Nicotiana tabacum HOM05D005147 ORTHO05D006132 3.2e-28 127.9 71 80.3
Potri.010G179000 Populus trichocarpa HOM05D005147 ORTHO05D006132 3.2e-28 127.9 72 81.9
RcHm_v2.0_Chr3g0447391 Rosa chinensis HOM05D005147 ORTHO05D006132 7.1e-28 126.7 69 79.7
arahy.Tifrunner.gnm1.ann1.9U7TDI Arachis hypogaea HOM05D005147 ORTHO05D006132 9.3e-28 126.3 72 77.8
arahy.Tifrunner.gnm1.ann1.IZJM3F Arachis hypogaea HOM05D005147 ORTHO05D006132 9.3e-28 126.3 72 77.8
PGR119G0204 Punica granatum HOM05D005147 ORTHO05D006132 1.2e-27 125.9 72 75.0
FAN02G4331 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.6e-27 125.6 69 78.3
FAN09G3357 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.6e-27 125.6 69 78.3
Atru.chr10.460 Acer truncatum HOM05D005147 ORTHO05D006132 3.5e-27 124.4 72 76.4
SGA_v2.0_scaffold62G21485 Striga asiatica HOM05D005147 ORTHO05D006132 4.6e-27 124.0 72 79.2
Potri.008G078200 Populus trichocarpa HOM05D005147 ORTHO05D006132 6.0e-27 123.6 70 78.6
Sc16g0010670 Simmondsia chinensis HOM05D005147 ORTHO05D006132 6.0e-27 123.6 72 77.8
TAR362G0740 Trochodendron aralioides HOM05D005147 ORTHO05D006132 6.0e-27 123.6 72 76.4
Sabra08G0058100 Salix brachista HOM05D005147 ORTHO05D006132 7.9e-27 123.2 70 80.0
PSO017G2923 Papaver somniferum HOM05D005147 ORTHO05D006132 1.8e-26 122.1 71 77.5
PSO675G5070 Papaver somniferum HOM05D005147 ORTHO05D006132 1.8e-26 122.1 71 77.5
Hund07384 Selenicereus undatus HOM05D005147 ORTHO05D006132 2.3e-26 121.7 72 75.0
AUR62000267 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.1e-26 120.6 72 75.0
AUR62006615 Chenopodium quinoa HOM05D005147 ORTHO05D006132 5.1e-26 120.6 72 75.0
Peaxi162Scf00254g00618 Petunia axillaris HOM05D005147 ORTHO05D006132 6.7e-26 120.2 71 80.3
Sabra10G0137300 Salix brachista HOM05D005147 ORTHO05D006132 1.1e-25 119.4 72 77.8
HPP92_011449 Vanilla planifolia HOM05D005147 ORTHO05D006132 2.5e-25 118.2 72 72.2
Zm00001eb196230 Zea mays HOM05D005147 ORTHO05D006132 4.3e-25 117.5 69 72.5
FvH4_7g28070 Fragaria vesca HOM05D005147 ORTHO05D001533 5.7e-25 117.1 69 75.4
Zm00001eb093390 Zea mays HOM05D005147 ORTHO05D006132 5.7e-25 117.1 69 72.5
Ah.06g195220 Amaranthus hybridus HOM05D005147 ORTHO05D006132 1.6e-24 115.5 72 73.6
Carub.0006s1445 Capsella rubella HOM05D005147 ORTHO05D006132 2.8e-24 114.8 72 72.2
BcaB08g36860 Brassica carinata HOM05D005147 ORTHO05D006132 4.8e-24 114.0 72 70.8
Os04g0496400 Oryza sativa ssp. japonica HOM05D005147 ORTHO05D006132 6.2e-24 113.6 69 69.6
AL6G27150 Arabidopsis lyrata HOM05D005147 ORTHO05D006132 8.2e-24 113.2 71 70.4
BcaC04g18905 Brassica carinata HOM05D005147 ORTHO05D006132 8.2e-24 113.2 72 69.4
BolC9t58914H Brassica oleracea HOM05D005147 ORTHO05D006132 8.2e-24 113.2 72 69.4
BraA10t44347Z Brassica rapa HOM05D005147 ORTHO05D006132 8.2e-24 113.2 72 69.4
THA.LOC104820936 Tarenaya hassleriana HOM05D005147 ORTHO05D006132 8.2e-24 113.2 72 70.8
AT5G16260 Arabidopsis thaliana HOM05D005147 ORTHO05D006132 1.1e-23 112.8 70 71.4
Sp6g27900 Schrenkiella parvula HOM05D005147 ORTHO05D006132 2.4e-23 111.7 72 68.1
Aa31LG11G13360 Aethionema arabicum HOM05D005147 ORTHO05D006132 9.0e-23 109.8 72 66.7
CARHR197050 Cardamine hirsuta HOM05D005147 ORTHO05D006132 9.0e-23 109.8 71 69.0
Thhalv10013396m.g Eutrema salsugineum HOM05D005147 ORTHO05D006132 2.2e-21 105.1 72 62.5
ECA232G4784 Erigeron canadensis HOM05D005147 ORTHO05D006132 3.8e-21 104.4 69 66.7
Pp3c20_9510 Physcomitrium patens HOM05D005147 ORTHO05D006132 1.4e-20 102.4 72 63.9
FAN06G0735 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.9e-20 102.1 69 68.1
Mapoly0021s0138 Marchantia polymorpha HOM05D005147 ORTHO05D006132 3.2e-20 101.3 70 65.7
AagrBONN_evm.TU.Sc2ySwM_368.1306 Anthoceros agrestis HOM05D005147 ORTHO05D006132 4.2e-20 100.9 72 62.5
Eucgr.B01442 Eucalyptus grandis HOM05D005147 ORTHO05D006132 4.2e-20 100.9 46 95.7
SMO364G0719 Selaginella moellendorffii HOM05D005147 ORTHO05D006132 1.6e-19 99.0 70 62.9
SHI13696 Sapria himalayana HOM05D005147 ORTHO05D006132 1.0e-18 96.3 44 90.9
BcaC06g35123 Brassica carinata HOM05D005147 ORTHO05D006132 3.0e-18 94.7 72 63.9
C05p37710 Brassica napus HOM05D005147 ORTHO05D006132 3.0e-18 94.7 72 63.9
Nitab4.5_0000798g0160 Nicotiana tabacum HOM05D005147 ORTHO05D006132 6.7e-18 93.6 65 67.7
A09p57480 Brassica napus HOM05D005147 ORTHO05D006132 1.9e-17 92.0 72 63.9
C02p46260 Brassica napus HOM05D005147 ORTHO05D006132 1.9e-17 92.0 72 62.5
BolC9t55790H Brassica oleracea HOM05D005147 ORTHO05D006132 1.9e-17 92.0 72 62.5
BraA09t41139Z Brassica rapa HOM05D005147 ORTHO05D006132 1.9e-17 92.0 72 63.9
FAN06G0198 Fragaria x ananassa HOM05D005147 ORTHO05D006132 3.3e-17 91.3 53 75.5
CBR_g50472 Chara braunii HOM05D005147 ORTHO05D006132 5.7e-17 90.5 72 55.6
A03p60580 Brassica napus HOM05D005147 ORTHO05D006132 4.8e-16 87.4 72 61.1
BcaC05g27774 Brassica carinata HOM05D005147 ORTHO05D006132 1.1e-15 86.3 72 58.3
BcaC04g21654 Brassica carinata HOM05D000305 ORTHO05D000065 1.3e-13 79.3 59 62.7
C02p08230 Brassica napus HOM05D005147 ORTHO05D006132 2.5e-12 75.1 74 52.7
FAN16G1629 Fragaria x ananassa HOM05D000071 ORTHO05D006132 1.2e-11 72.8 33 90.9
FAN17G2636 Fragaria x ananassa HOM05D005147 ORTHO05D006132 1.6e-11 72.4 33 87.9
Ciclev10000750m.g Citrus clementina HOM05D005147 ORTHO05D006132 6.1e-11 70.5 31 93.5
CBR_g19604 Chara braunii HOM05D005147 ORTHO05D006132 1.0e-10 69.7 50 58.0
Rhsim05G0163700 Rhododendron simsii HOM05D005147 ORTHO05D006132 1.4e-10 69.3 31 93.5
CDE09G1068 Ceratophyllum demersum HOM05D005147 ORTHO05D006132 2.3e-10 68.6 34 79.4
MCO16G453 Micromonas commoda HOM05D005147 ORTHO05D006132 3.9e-10 67.8 68 50.0
Cre17.g707050 Chlamydomonas reinhardtii HOM05D005147 ORTHO05D006132 8.8e-10 66.6 72 44.4
Zm00001eb321590 Zea mays HOM05D005147 ORTHO05D006132 2.2e-08 62.0 31 77.4
Cfa026444 Carpinus fangiana HOM05D005147 ORTHO05D006132 3.4e-06 54.7 76 40.8
PRCOL_00001696 Prasinoderma coloniale HOM05D005147 ORTHO05D006132 5.9e-06 53.9 74 41.9


User provided reference genes

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