Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaC05g24542 Brassica carinata HOM05D000563 ORTHO05D006573 8.1e-48 193.4 94 100.0
BcaC05g24543 Brassica carinata HOM05D000563 ORTHO05D006573 8.1e-48 193.4 94 100.0
Carub.0001s0244 Capsella rubella HOM05D000563 ORTHO05D006573 8.1e-48 193.4 94 100.0
Thhalv10009199m.g Eutrema salsugineum HOM05D000563 ORTHO05D006573 8.1e-48 193.4 94 100.0
Sp1g02320 Schrenkiella parvula HOM05D000563 ORTHO05D006573 8.1e-48 193.4 94 100.0
CARHR002690 Cardamine hirsuta HOM05D000563 ORTHO05D006573 1.8e-47 192.2 94 98.9
BolC5t28963H Brassica oleracea HOM05D000563 ORTHO05D006573 2.4e-47 191.8 94 98.9
CARHR002640 Cardamine hirsuta HOM05D000563 ORTHO05D006573 2.4e-47 191.8 94 98.9
A10p01870 Brassica napus HOM05D000563 ORTHO05D006573 3.1e-47 191.4 93 100.0
BraA10t42461Z Brassica rapa HOM05D000563 ORTHO05D006573 3.1e-47 191.4 93 100.0
BcaB03g16569 Brassica carinata HOM05D000563 ORTHO05D006573 4.0e-47 191.0 94 98.9
AL1G12840 Arabidopsis lyrata HOM05D000563 ORTHO05D006573 6.9e-47 190.3 94 98.9
AT1G03330 Arabidopsis thaliana HOM05D000563 ORTHO05D006573 6.9e-47 190.3 94 98.9
Ciclev10023059m.g Citrus clementina HOM05D000563 ORTHO05D006573 6.9e-47 190.3 94 97.9
Aa31LG1G9230 Aethionema arabicum HOM05D000280 ORTHO05D003998 9.0e-47 189.9 93 98.9
BcaC07g36971 Brassica carinata HOM05D000563 ORTHO05D006573 1.2e-46 189.5 94 97.9
A08p37390 Brassica napus HOM05D000563 ORTHO05D006573 1.2e-46 189.5 94 97.9
C08p00530 Brassica napus HOM05D000563 ORTHO05D006573 1.2e-46 189.5 94 97.9
BolC8t46853H Brassica oleracea HOM05D000563 ORTHO05D006573 1.2e-46 189.5 94 97.9
BraA08t35636Z Brassica rapa HOM05D000563 ORTHO05D006573 1.2e-46 189.5 94 97.9
MELO3C023545.2 Cucumis melo HOM05D000563 ORTHO05D006573 2.0e-46 188.7 94 96.8
PSO210G0485 Papaver somniferum HOM05D000563 ORTHO05D006573 2.0e-46 188.7 94 96.8
PSO832G0267 Papaver somniferum HOM05D000563 ORTHO05D006573 2.0e-46 188.7 94 96.8
Potri.003G014900 Populus trichocarpa HOM05D000563 ORTHO05D006573 2.0e-46 188.7 94 96.8
Potri.004G219000 Populus trichocarpa HOM05D000563 ORTHO05D006573 2.0e-46 188.7 94 96.8
Atru.chr5.1355 Acer truncatum HOM05D000563 ORTHO05D006573 2.6e-46 188.3 93 97.8
Actinidia24875 Actinidia chinensis HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
CSS0039726 Camellia sinensis var. sinensis HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Duzib133G0114 Durio zibethinus HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Eucgr.K03403 Eucalyptus grandis HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Gohir.D08G079000 Gossypium hirsutum HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Gorai.004G083500 Gossypium raimondii HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Manes.01G210300 Manihot esculenta HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Manes.05G073100 Manihot esculenta HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
PGR044G0879 Punica granatum HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Thecc.01G284300 Theobroma cacao HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
TWI23G1003 Tripterygium wilfordii HOM05D000563 ORTHO05D006573 2.6e-46 188.3 94 95.7
Nn4g26163 Nelumbo nucifera HOM05D000563 ORTHO05D006573 3.4e-46 188.0 93 96.8
Sabra03G0008000 Salix brachista HOM05D000563 ORTHO05D006573 4.4e-46 187.6 93 96.8
THA.LOC104801217 Tarenaya hassleriana HOM05D000563 ORTHO05D006573 4.4e-46 187.6 94 95.7
Aqoxy2G03235 Aquilegia oxysepala HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
arahy.Tifrunner.gnm1.ann1.VC9ZTT Arachis hypogaea HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
CiPaw.08G103000 Carya illinoinensis HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
Ca_08564_v3 Cicer arietinum L. HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
CsaV3_7G031130 Cucumis sativus L. HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
Migut.D00260 Erythranthe guttata HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 95.7
Gohir.A08G069900 Gossypium hirsutum HOM05D000563 ORTHO05D006573 5.8e-46 187.2 94 94.7
CiPaw.07G094800 Carya illinoinensis HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
MELO3C028853.2 Cucumis melo HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
Dinv11258 Davidia involucrata HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
HanXRQChr01g0002411 Helianthus annuus HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
HanXRQChr15g0466481 Helianthus annuus HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
Medtr7g104700 Medicago truncatula HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
Phvul.001G148500 Phaseolus vulgaris HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
Psat0s3362g0080 Pisum sativum HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
GSVIVG01011077001 Vitis vinifera HOM05D000563 ORTHO05D006573 7.6e-46 186.8 94 94.7
ClCG09G008910 Citrullus lanatus HOM05D000563 ORTHO05D006573 9.9e-46 186.4 93 95.7
QL12p022805 Quercus lobata HOM05D000563 ORTHO05D006573 9.9e-46 186.4 93 94.6
Lalb_Chr02g0142891 Lupinus albus HOM05D000563 ORTHO05D006573 1.3e-45 186.0 94 93.6
Lalb_Chr21g0306571 Lupinus albus HOM05D000563 ORTHO05D006573 1.3e-45 186.0 94 93.6
TWI59G0344 Tripterygium wilfordii HOM05D000563 ORTHO05D006573 1.3e-45 186.0 94 94.7
FvH4_3g16480 Fragaria vesca HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 94.7
FAN11G3431 Fragaria x ananassa HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 94.7
FAN16G1803 Fragaria x ananassa HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 94.7
FAN21G1624 Fragaria x ananassa HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 94.7
Medtr7g094500 Medicago truncatula HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 93.6
RcHm_v2.0_Chr5g0027471 Rosa chinensis HOM05D000563 ORTHO05D006573 1.7e-45 185.7 94 94.7
SGA_v2.0_scaffold11G05791 Striga asiatica HOM05D000563 ORTHO05D000536 2.2e-45 185.3 93 95.7
HPP92_004165 Vanilla planifolia HOM05D000563 ORTHO05D006573 2.2e-45 185.3 94 93.6
Cfa006100 Carpinus fangiana HOM05D000563 ORTHO05D000536 2.9e-45 184.9 93 94.6
Haze_04755 Corylus avellana HOM05D000563 ORTHO05D000536 2.9e-45 184.9 93 94.6
Duzib138G0853 Durio zibethinus HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 94.7
MD05G1209800 Malus domestica HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 93.6
MD10G1196100 Malus domestica HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 93.6
Nitab4.5_0006874g0030 Nicotiana tabacum HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 93.6
Solyc09g072970.3 Solanum lycopersicum HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 93.6
PGSC0003DMG400003836 Solanum tuberosum HOM05D000563 ORTHO05D006573 2.9e-45 184.9 94 93.6
CANSAT56G4364 Cannabis sativa HOM05D000563 ORTHO05D006573 3.8e-45 184.5 94 93.6
Duzib211G0084 Durio zibethinus HOM05D000563 ORTHO05D006573 3.8e-45 184.5 93 94.6
ECA248G1345 Erigeron canadensis HOM05D000563 ORTHO05D006573 3.8e-45 184.5 94 92.6
Prupe.4G147700 Prunus persica HOM05D000563 ORTHO05D006573 4.9e-45 184.1 94 93.6
Solyc06g084350.3 Solanum lycopersicum HOM05D000563 ORTHO05D006573 4.9e-45 184.1 94 92.6
Sopen06g035740 Solanum pennellii HOM05D000563 ORTHO05D006573 4.9e-45 184.1 94 92.6
TAR365G0146 Trochodendron aralioides HOM05D000563 ORTHO05D006573 4.9e-45 184.1 94 93.6
vmacro14940 Vaccinium macrocarpon HOM05D000563 ORTHO05D006573 4.9e-45 184.1 93 94.6
Sopen09g028780 Solanum pennellii HOM05D000563 ORTHO05D006573 6.4e-45 183.7 94 92.6
CAN.G1679.5 Capsicum annuum HOM05D000563 ORTHO05D006573 1.1e-44 183.0 93 93.5
Peaxi162Scf00980g00016 Petunia axillaris HOM05D000563 ORTHO05D006573 1.4e-44 182.6 93 92.5
SEGI_10645 Sequoiadendron giganteum HOM05D000563 ORTHO05D006573 1.9e-44 182.2 94 92.6
Zm00001eb416130 Zea mays HOM05D000563 ORTHO05D006573 1.9e-44 182.2 94 93.6
FAN25G0039 Fragaria x ananassa HOM05D000563 ORTHO05D006573 2.4e-44 181.8 93 93.5
Os08g0154700 Oryza sativa ssp. japonica HOM05D000563 ORTHO05D006573 2.4e-44 181.8 94 92.6
Zm00001eb172640 Zea mays HOM05D000563 ORTHO05D006573 2.4e-44 181.8 94 92.6
AUR62011805 Chenopodium quinoa HOM05D000563 ORTHO05D006573 3.2e-44 181.4 94 92.6
AUR62024651 Chenopodium quinoa HOM05D000563 ORTHO05D006573 3.2e-44 181.4 94 92.6
Cc01_g19800 Coffea canephora HOM05D000563 ORTHO05D006573 3.2e-44 181.4 93 92.5
Gorai.007G134200 Gossypium raimondii HOM05D000563 ORTHO05D006573 3.2e-44 181.4 94 92.6
Lsat_1_v5_gn_5_187481 Lactuca sativa HOM05D000563 ORTHO05D006573 3.2e-44 181.4 92 92.4
Nn1g02139 Nelumbo nucifera HOM05D000563 ORTHO05D006573 3.2e-44 181.4 94 91.5
Hma1.2p1_0628F.1_g191850 Hydrangea macrophylla HOM05D000563 ORTHO05D006573 4.2e-44 181.0 91 93.4
Nitab4.5_0007767g0050 Nicotiana tabacum HOM05D000563 ORTHO05D006573 4.2e-44 181.0 94 90.4
MBI19_g06754_MAGBIO Magnolia biondii HOM05D000563 ORTHO05D006573 5.4e-44 180.6 94 90.4
MBI19_g44975_MAGBIO Magnolia biondii HOM05D000563 ORTHO05D006573 5.4e-44 180.6 94 90.4
unitig_26.g10157 Utricularia gibba HOM05D000563 ORTHO05D006573 5.4e-44 180.6 93 92.5
Ah.02g112280 Amaranthus hybridus HOM05D000563 ORTHO05D006573 7.1e-44 180.3 94 91.5
AagrBONN_evm.TU.Sc2ySwM_344.5103 Anthoceros agrestis HOM05D000563 ORTHO05D006573 7.1e-44 180.3 94 91.5
Hund22131 Selenicereus undatus HOM05D000563 ORTHO05D006573 7.1e-44 180.3 94 90.4
MBI17_g11989_MAGBIO Magnolia biondii HOM05D000563 ORTHO05D006573 1.2e-43 179.5 94 89.4
Gohir.D11G125000 Gossypium hirsutum HOM05D000563 ORTHO05D006573 1.6e-43 179.1 91 93.4
CDE11G0229 Ceratophyllum demersum HOM05D000563 ORTHO05D006573 2.1e-43 178.7 94 88.3
CDE11G0885 Ceratophyllum demersum HOM05D000563 ORTHO05D006573 2.1e-43 178.7 94 88.3
Sc24g0004090 Simmondsia chinensis HOM05D004227 ORTHO05D005027 2.1e-43 178.7 93 91.4
Mapoly0002s0343 Marchantia polymorpha HOM05D000563 ORTHO05D006573 2.7e-43 178.3 92 91.3
Glyma.03G150900 Glycine max HOM05D000563 ORTHO05D006573 4.6e-43 177.6 94 89.4
Glyma.19G153500 Glycine max HOM05D000563 ORTHO05D006573 4.6e-43 177.6 94 89.4
Nitab4.5_0001323g0030 Nicotiana tabacum HOM05D000563 ORTHO05D006573 6.0e-43 177.2 91 92.3
CDE05G0374 Ceratophyllum demersum HOM05D000563 ORTHO05D006573 7.8e-43 176.8 94 87.2
Pp3c2_19710 Physcomitrium patens HOM05D000563 ORTHO05D006573 2.3e-42 175.3 94 89.4
ATR0626G009 Amborella trichopoda HOM05D000563 ORTHO05D006573 3.0e-42 174.9 94 88.3
arahy.Tifrunner.gnm1.ann1.A338HQ Arachis hypogaea HOM05D000563 ORTHO05D006573 3.3e-41 171.4 86 95.3
SMO146G0171 Selaginella moellendorffii HOM05D000563 ORTHO05D006573 1.1e-39 166.4 94 84.0
SGA_v2.0_scaffold1G00443 Striga asiatica HOM05D000563 ORTHO05D003998 1.1e-39 166.4 103 79.6
Nitab4.5_0002093g0040 Nicotiana tabacum HOM05D000563 ORTHO05D006573 1.4e-39 166.0 86 90.7
Sabra01G0166100 Salix brachista HOM05D000563 ORTHO05D006573 3.4e-38 161.4 154 59.1
PGSC0003DMG400020045 Solanum tuberosum HOM05D000563 ORTHO05D006573 4.5e-38 161.0 85 89.4
Cre10.g441950 Chlamydomonas reinhardtii HOM05D000563 ORTHO05D006573 3.8e-37 157.9 94 80.9
EL10Ac2g04686 Beta vulgaris HOM05D000563 ORTHO05D006573 4.2e-36 154.5 152 56.6
TPR.G37604 Trifolium pratense HOM05D000563 ORTHO05D006573 3.9e-34 147.9 134 61.2
PRCOL_00001823 Prasinoderma coloniale HOM05D000563 ORTHO05D006573 6.7e-34 147.1 92 71.7
Ah.11g049240 Amaranthus hybridus HOM05D000563 ORTHO05D006573 1.6e-32 142.5 184 47.3
Cpa.g.sc50.145 Carica papaya HOM05D000563 ORTHO05D000536 7.6e-30 133.7 65 98.5
TPR.G29312 Trifolium pratense HOM05D000563 ORTHO05D006573 6.2e-24 114.0 70 78.6
Ca_08598_v3 Cicer arietinum L. HOM05D000563 ORTHO05D006573 2.4e-23 112.1 56 94.6
DCAR_018402 Daucus carota HOM05D000563 ORTHO05D006573 4.0e-23 111.3 54 98.1
Rhsim01G0276800 Rhododendron simsii HOM05D000563 ORTHO05D000536 4.0e-23 111.3 83 68.7
SalBow6G0934 Salvia bowleyana HOM05D000563 ORTHO05D006573 4.0e-23 111.3 54 98.1
TPR.G20367 Trifolium pratense HOM05D000563 ORTHO05D006573 4.0e-23 111.3 54 98.1
Sed0000117 Sechium edule HOM05D000563 ORTHO05D006573 1.2e-22 109.8 55 94.5
TAR362G0386 Trochodendron aralioides HOM05D000563 ORTHO05D006573 1.2e-22 109.8 54 96.3
SalBow4G1726 Salvia bowleyana HOM05D000563 ORTHO05D006573 2.9e-21 105.1 83 63.9
AUR62041552 Chenopodium quinoa HOM05D000563 ORTHO05D006573 1.0e-18 96.7 54 85.2
BcaB01g01720 Brassica carinata HOM05D005272 ORTHO05D006573 4.1e-15 84.7 44 95.5
Oeu011172.1 Olea europaea HOM05D000563 ORTHO05D006573 9.0e-15 83.6 40 95.0
CSS0020898 Camellia sinensis var. sinensis HOM05D000563 ORTHO05D006573 3.4e-14 81.6 40 92.5
MELO3C029155.2 Cucumis melo HOM05D000563 ORTHO05D006573 1.0e-13 80.1 43 83.7
MBI17_g11991_MAGBIO Magnolia biondii HOM05D000563 ORTHO05D006573 1.0e-13 80.1 43 81.4
Actinidia24317 Actinidia chinensis HOM05D000563 ORTHO05D006573 1.7e-13 79.3 40 90.0
MBI17_g11992_MAGBIO Magnolia biondii HOM05D000563 ORTHO05D006573 7.2e-12 73.9 43 72.1
Gohir.A11G120250 Gossypium hirsutum HOM05D000563 ORTHO05D006573 1.8e-10 69.3 34 97.1
Pp3c11_10290 Physcomitrium patens HOM05D021114 ORTHO05D018332 4.5e-06 54.7 78 38.5


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