Gene: Duzib138G0853

General Information

Structural Information

  • Species Durio zibethinus
  • Gene Identifier Duzib138G0853
  • Transcript Identifier Duzib138G0853.01
  • Gene Type Coding gene
  • Location NW_019167893.1 : 6019045-6021452 : positive

Gene Family Information

  • ID HOM05D000563
  • #Genes/#Species 981/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name LOC111305170
  • name XM_022902432.1
  • pid XP_022758167.1
  • id gene-LOC111305170
  • uniprot A0A6P6A067

Descriptions

  • product sm-like protein LSM2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0006397
IEA
InterPromRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D000563

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0005515
ISO
PLAZA Homology (enrichment)protein binding HOM05D000563

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046540
IEA
GOA DatabaseU4/U6 x U5 tri-snRNP complex
GO:0005688
IEA
GOA DatabaseU6 snRNP
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016654 U6 snRNA-associated Sm-like protein LSm2
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
Mapman id Description
16.2.3.2 RNA processing.pre-mRNA splicing.U6-associated LSm accessory ribonucleoprotein complex.component LSm2